FastQCFastQC Report
Thu 22 Jun 2023
ERR2201450_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2201450_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11326057
Total Bases306.7 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1516081.3385770528966965No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1431901.2642528639931796No Hit
ATGTACACGGAGTCGACCCGCAACGCGA844940.7460142572123732No Hit
ATCGTGACGGTCGTGCGACCATTCGT727870.6426508360323456No Hit
GGGGCTACGCCTGTCTGAGCGTCGCT724900.6400285642214232No Hit
AAGTCCTTCTGATCGAGGCC549900.4855175989313845No Hit
AGATCAGACGTGGCGACCCGCTGAA535030.4723885814807395No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT524650.463223873939536No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT437620.38638336360129566No Hit
ACGGAGTCGAGCTCAACCCGCAACGCGA430920.38046780093019134No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT376370.3323045257497821No Hit
CGGGGCTACGCCTGTCTGAGCGTCGCT374980.3310772672254784No Hit
ACGCCTGTCTGAGCGTCGCT348870.30802423120420463No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGA332170.29327947051652664No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT318550.2812541028179533No Hit
ACACGGAGTCGAGCTCAACCCGCAACGCGA315640.2786848061951304No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT304540.26888439639673367No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG293780.2593841793309004No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTG281070.24816226865183533No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC256570.22653073351122988No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC253570.2238819741062578No Hit
CGCGGCGCGGGAAATGTGGCGTACGGAA237010.20926082219081188No Hit
ACGGACC235250.2077068833398949No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC233140.20584392255839787No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA229060.20224160976763583No Hit
AAGTCCTTCTGATCGAGGC213680.18866230321814556No Hit
AATTTTTGACAGTCTCTACGGAGACTG211630.18685231762474797No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA208930.1844684341602731No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCG206780.18257015658670975No Hit
AGGAGTGGAGCCTGCGGCTTAATTTG199140.1758246493020475No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC193090.17048298450202043No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT190160.16789602948316434No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT185890.1641259619300874No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC177700.1568948487545136No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT177270.15651519323980093No Hit
GGGGCTACGCCTGTCTGAGCGTCGCTT172350.1521712278156467No Hit
CGCTCGCCGAATCCCGGGGCCGAGGGAGC169410.14957544359877403No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC166610.14710326815413344No Hit
CGCCGCGGCGCGGGAAATGTGGCGTACGGAA165490.14611439797627718No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC163610.14445450874916133No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC159980.1412495098691451No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC154070.1360314538413501No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT153820.13581072389093574No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG150440.13282645496133386No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT149190.13172280520926213No Hit
ACACGGAGTCGAGCTCAACCCGCAACGCG139200.12290243639070508No Hit
AGCCGATCGAAAGGGAGTCGGGTT134310.11858495856060056No Hit
ACGGAGTCGAGCTCAACCCGCAACGCG132260.11677497296720296No Hit
ATGTACACGGAGTCGACCCGCAACGCG131630.11621873349215883No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG130970.11563600642306499No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130180.11493849977975566No Hit
TGCGCCGCGACCGGCTCCGGGACGGC127480.11255461631528077No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG125990.11123906581081129No Hit
CGACTGTT124990.11035614600915394No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTT122310.10798992094071219No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT121670.10742485226765147No Hit
AGTGCGGTAACGCGACCGATCCCGGAGA120640.10651544487194439No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG119700.10568550025838648No Hit
AGATCAGACGTGGCGACCCGCTGA119550.10555306228813786No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC119530.10553540389210472No Hit
CTGAGCGTCGCT117390.10364595551655797No Hit
ACACGGAGTCGACCCGCAACGCGA117160.10344288396217677No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATT116690.1030279116553978No Hit
GCGACCTCAGATCAGACGTGGCGACCCGC116490.10285132769506633No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCC114440.10104134210166874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)