FastQCFastQC Report
Thu 22 Jun 2023
ERR2213251_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2213251_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25848915
Total Bases927.1 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG396926215.355623243760908No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1979610.7658387208902192No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1596050.6174533824727266No Hit
AGCTAGGAATAA1332280.5154104147117974No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1240330.47983832203401966No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1089930.42165406168885616No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC952170.36835975513865865No Hit
AGGAATAATGGAAT919020.3555352323298676No Hit
AGCTAGGAATAATGGAAT807710.31247346358638267No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT681750.2637441455473083No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT664080.2569082686836178No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT633410.24504316718902902No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG611820.23669078566740617No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG594870.23013345047558087No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA573550.22188552208090745No Hit
CTGAGCGTCGCT532930.2061711294265156No Hit
GTCTGAGCGTCGCT513450.19863502974883082No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG512010.19807794640510057No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA506650.19600435840343786No Hit
AGCTAGGAATAATGGAA502770.1945033282828312No Hit
AAGTCCTTCTGATCGAGGCC478700.1851915254470062No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT477040.18454933214798377No Hit
GGCCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC461370.17848718215058543No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA423140.16369739310141257No Hit
AGGAATAATGGAA419010.16209964712251945No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT404550.1565056018792278No Hit
AATTTTGGAGGCTCTGAAATGTTAAAACT395090.15284587380166634No Hit
ACCGGCCCGTCTCGC389230.15057885408343058No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC386230.14941826378399248No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC379960.14699263005816685No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT371870.14386290488401543No Hit
AAGTCCTTCTGATCGAGGC355780.13763827224469577No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT343250.13279087342737597No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT341200.1319978033894266No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG313060.12111146638069722No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC303180.1172892556612144No Hit
CGGCGACGACCCATTCGAACGTCTGCCCT292120.11301054609061928No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG291550.11279003393372604No Hit
TCTATAGTGTTTACTATAGTGTCCATTGT285820.11057330646179926No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG265770.1028166946272213No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT260660.10083982248384506No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC259670.1004568276850305No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)