FastQCFastQC Report
Thu 22 Jun 2023
ERR2213252_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2213252_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22029915
Total Bases846.7 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG387086317.57093933408277No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1549470.703348151819923No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1367310.6206605881139351No Hit
AACGATGCCGACTGGCGATGCGGCGGCG852330.38689663577912126No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC814890.36990156339686286No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA786600.357059934184948No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG752540.3415991391705324No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC744130.337781602879539No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT553910.25143537775792596No Hit
AGCTAGGAATAATGGAAT539720.24499413638227838No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT529200.24021881155692157No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT484650.2199963095636093No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT462930.2101369887264658No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT432750.196437435187562No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT401180.18210692142933824No Hit
AGCTAGGAATAA391590.17775374984424588No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA373170.16939239211771812No Hit
ACTCTAAAACTCTTGTAGTTTAAATCTAAT348890.1583710150493091No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT346890.1574631586186329No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC345050.15662793070241077No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG332820.15107638862882586No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG316710.14376360507972907No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG307890.13975995822044707No Hit
AGGAATAATGGAAT307500.1395829262164652No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG301340.13678672840998252No Hit
AAGTCCTTCTGATCGAGGCC283680.1287703561271117No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC282230.12811216021487146No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG274700.12469408075337558No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT263400.11956469192005506No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC256560.11645982292714248No Hit
AGCTAGGAATAATGGAA249670.11333225752346299No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA244570.11101722362523868No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA236570.1073857979025339No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG235880.1070725874339506No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC235820.10704535174103033No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC232270.10543390657658007No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT229830.10432632173115511No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAA228280.10362273299738106No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC227550.10329136540018426No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT227160.10311433339620238No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG224090.10172077377511443No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC223900.10163452741420019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)