FastQCFastQC Report
Thu 22 Jun 2023
ERR2213255_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2213255_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19373074
Total Bases704.1 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG287330914.831456277924712No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1168640.6032289971121775No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1108010.5719329828606446No Hit
AACGATGCCGACTGGCGATGCGGCGGCG967520.4994148063441042No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA801780.41386307614372403No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC587650.30333337910132385No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG492840.2543943206947953No Hit
AGCTAGGAATAATGGAAT483870.2497641830098827No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC480210.2478749629511558No Hit
AGCTAGGAATAA439300.22675802508161585No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT430830.22238597756866052No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT423200.21844752154459326No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT414360.21388448730438958No Hit
AAGTCCTTCTGATCGAGGCC402450.20773677940836857No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC386290.19939530505071112No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT357810.1846944888560277No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA351230.18129802219307065No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT334450.17263651602218627No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT312540.16132700468702077No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT295860.1527171165505278No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT284040.14661586488545908No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG272400.14060752568229493No Hit
AGGAATAATGGAAT261440.1349501891129926No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC253490.13084655537887274No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT249160.12861149448972323No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC220820.11398294354318783No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT218160.1126099038283754No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG209230.1080004133572194No Hit
CTGAGCGTCGCT199530.1029934640212493No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC199060.10275085925960949No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT196730.10154815905828883No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC195570.10094938985934808No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG194520.1004074004982379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)