FastQCFastQC Report
Thu 22 Jun 2023
ERR2213256_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2213256_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21075171
Total Bases795.5 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG368334917.477196270435954No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1249150.5927116795398718No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1191820.5655090532836009No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC691900.3283010135481226No Hit
AACGATGCCGACTGGCGATGCGGCGGCG590070.27998349337236694No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA538590.25555664530551137No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT529570.25127672748183155No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC478040.22682615481506652No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT353280.16762853312079887No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT346340.16433555865335564No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT341180.1618871799426918No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT340460.16154554570399451No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA340420.1615265660240669No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT332130.15759302735906627No Hit
AGCTAGGAATAATGGAAT317910.15084575114479498No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT317510.1506559543455187No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA263090.1248340998039826No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG251640.11940116642469947No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC248350.11784008775065216No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC247450.11741304495228057No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG241530.11460405232299183No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT240020.1138875694057239No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC230720.10947479382255071No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG214200.10163618601244089No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC213760.10142740953323699No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)