FastQCFastQC Report
Thu 22 Jun 2023
ERR2213257_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2213257_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19719970
Total Bases696.1 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG260703413.220273661673929No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1633640.8284191101710602No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1438700.7295650044092359No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT904500.4586720973713449No Hit
AGCTAGGAATAATGGAAT814720.4131446447433743No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC803960.4076882469902338No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT760400.3855989638929471No Hit
AACGATGCCGACTGGCGATGCGGCGGCG680620.3451425128942894No Hit
AGGAATAATGGAAT646650.32791632035951374No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA588600.29847915590135277No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA467860.23725188222902976No Hit
ACCGGCCCGTCTCGC450340.2283674873744737No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT441480.2238745799309025No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC383620.19453376450369853No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC381390.19340293114036178No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT375870.1906037382409811No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC365910.18555302061818552No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG340700.1727690255106879No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC329700.1671909237184438No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT307840.15610571415676594No Hit
AAGTCCTTCTGATCGAGGCC302040.15316453321176451No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC298300.15126797860240151No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT295800.15000022819507333No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT292850.14850428271442603No Hit
GTCTGAGCGTCGCT291950.1480478925677879No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC283790.1439099552382686No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG278680.14131867340568977No Hit
AGCTAGGAATAATGGAA277140.1405377391547756No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT275890.13990386395111148No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC268030.1359180566704716No Hit
AGTGCGGTAACGCGACCGATCCCGGAGA266890.13533996248472996No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT260180.13193732039146105No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT243600.12352959969006037No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC243160.12330647561837062No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT242390.12291600849291354No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG232470.1178855748766352No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG230140.11670403149700531No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA222320.11273850822288269No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC220470.11180037292145982No Hit
AGCGGAGGAAAAGAAACTAACCAGGATTCCCT205720.1043206455182234No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG200570.10170907967912729No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG199890.10136425156833404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)