FastQCFastQC Report
Fri 23 Jun 2023
ERR2603020.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2603020.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55977053
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length25-66
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGCTTCTGGCGCCAAGCGCCCGGC1595830.2850864621258286No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1589710.28399315698166533No Hit
TTCGCTTCTGGCGCCAAGCGCCCGG1309080.23386011407210022No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGG800040.14292285090463766No Hit
CTCGGTTGGCCTCGGATAGCCGGTC785090.1402521136652192No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGG725350.1295798833854294No Hit
TTCGGTTGGCCTCGGATAGCCGGTC720960.12879563345358677No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG658200.11758389638697128No Hit
TCTAAACCATTCGTAGACGACCTGCTT616740.11017728996915933No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGC594520.1062078062594685No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC589510.10531279665615836No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)