FastQCFastQC Report
Fri 23 Jun 2023
ERR3276518_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR3276518_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55020617
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length1-76
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
A1542240.28030220017343677No Hit
TCGGGTGCCA1360360.24724550071839432Illumina Small RNA Adapter 2 (100% over 10bp)
GGATACACAATTCTGAGGGATCATAGCATCTCCATTTTGGAAAAAAGTTA1328020.24136770403719757No Hit
C1247140.226667759832646No Hit
TACACA1090240.1981511766761903No Hit
T669610.12170165230971511No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)