FastQCFastQC Report
Fri 23 Jun 2023
ERR3949835_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR3949835_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34179596
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length15-51
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACGATTAGCTCAGCGGGAGAGCACTTCC2225810.6512101547367617No Hit
GGACGATTAGCTCAGCGGGAGAGCACTTC1289440.37725431277771687No Hit
ACCGAAGGGGTCACTGGTTCGATCCCAGTATCGCC527850.1544342419963068No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)