FastQCFastQC Report
Sat 30 Sept 2023
ERR4882121_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR4882121_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36742518
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA890920.24247657713605802No Hit
GTGGAATTAGTGTGTGTAAGTATGTATGTTGAGCTTGAACGCTTTCTTTA766060.20849414838689062No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT732180.19927322346280132No Hit
GGGCAACCAGCTATCACCAAGCTCGATAGGCTTTTCACCTCTACCTAAAA659800.1795739747613378No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG654760.17820226692139063No Hit
CCCGTGCGCTCGGCTTCGCTCCCCCCCACCCCGAGAAGGGGAGGGAGAGC639720.17410891654186575No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT632450.17213028241559275No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT602130.1638782622355931No Hit
CCGGCTCCCTCGGCCCCGGGATTCGGCGAGCGCTGCTGCCGGGGGGCTGT501640.13652847635537663No Hit
GGCAGATGTAAAGTAGGCTCGGGTGTCTACATCTAGGCCTACTGTGAATA501290.1364332188664914No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA473990.12900313473344424No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG453700.12348092202064105No Hit
CCCGTCCCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCCACCCGGGG448590.12209016268291684No Hit
CGGGTATCCGGCTCCCTCGGCCCCGGGATTCGGCGAGCGCTGCTGCCGGG447180.12170641108483637No Hit
GTTGGGTTAGTACCTATGATTCGATAATTGACAATGGTTATCCGGGTTGT441310.12010880691410426No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA438510.1193467470030225No Hit
GCTCGTTTGGTTTCGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTT428610.11665232088884055No Hit
CCGGGTTGTCATACACTTGTGCTAGGAGAATTGGTTCTTGTTACTCATAT420550.11445867700194091No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN367890.10012650738852466No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)