FastQCFastQC Report
Sat 30 Sept 2023
ERR4882125_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR4882125_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44530194
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3432700.7708702099972885No Hit
GTGGAATTAGTGTGTGTAAGTATGTATGTTGAGCTTGAACGCTTTCTTTA1460980.32808749946160126No Hit
GGCAGATGTAAAGTAGGCTCGGGTGTCTACATCTAGGCCTACTGTGAATA1434810.3222105881685582No Hit
GGGGGTTCGAATCCTTCCTTTCTTATTTAACTTTTACGTAGGAAGGTTCT1374710.30871412776688106No Hit
GGGCAACCAGCTATCACCAAGCTCGATAGGCTTTTCACCTCTACCTAAAA1309880.2941554667379172No Hit
CGAAGAATCAGAATAGGTGTTGATAGAGAATTGGGTCTCCACCTCCAGCG1193890.26810797186286683No Hit
ATGAAATTGGCTTGAAACCAGTTGTAGGGGGTTCGAATCCTTCCTTTCTT1067120.23963964765120943No Hit
GCTCGTTTGGTTTCGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTT970170.21786790329276357No Hit
GTCTGATATTGGGTTATAGCAGGGGGTTTTATATTAATGATAGTGGTGAT965670.21685735301310388No Hit
GTACACTTCTGGGTGGCCGAAGAATCAGAATAGGTGTTGATAGAGAATTG940480.21120051711429774No Hit
CCGAAGAATCAGAATAGGTGTTGATAGAGAATTGGGTCTCCACCTCCAGC811440.18222242642823427No Hit
GTTGGGTTAGTACCTATGATTCGATAATTGACAATGGTTATCCGGGTTGT789240.17723704504857984No Hit
GTGGAAGTGAGCTACTACATAGTATGTATCATGAAGTACAATGTCAAGGG754000.16932331352520044No Hit
GTGGGCTTTTGCTCATGTGTCATTTAGGGTATAGCCTGAGAATAGTGGGA745220.16735161764622No Hit
GTCGAAGAAAGTAGTATTTAGATTTCGGTCTGTAAGGAGTATAGTGATAC739190.165997480271476No Hit
CTCGTTTGGTTTCGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTT701040.15743025956725004No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG670770.15063262468607255No Hit
CCGTAAGTGAGATGAATGAGCCTATAGAGGAGACTGTATTTCATGTGGTG663160.14892367187980363No Hit
GGCGAATACTGCTCCTATAGATAAGACATAGTGGAAGTGAGCTACTACAT658690.14791985860200832No Hit
GTGACGATGACATTATAGATTTGGTCATCTCCTAGGAGTGCGCCTGGCTG640260.14378109378997989No Hit
GGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTTCTAGTTAATTCAT637790.14322641396981112No Hit
CCTGAGAATAGTGGGAATCAGTGGACGAAGCCAGCTATGATGGCGAATAC637370.14313209594370957No Hit
GTAAGCATCTGGATAATCAGAGTAACGACGAGGTATCCCCGCTAATCCTA629330.14132657944405094No Hit
GCCGTAAGTGAGATGAATGAGCCTATAGAGGAGACTGTATTTCATGTGGT622990.13990282638337484No Hit
CCGGGTTGTCATACACTTGTGCTAGGAGAATTGGTTCTTGTTACTCATAT605070.13587859060304117No Hit
GGGGTATACTGTTCATCCTGTTCCAGCTCCAGCTTCTACTATGGAGGATG602300.13525654076422844No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA601410.13505667637558463No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT600260.13479842463744937No Hit
GGAGAATTGGTTCTTGTTACTCATATTAACAGTATTTCATCTATGGGTCT594300.1334600069337223No Hit
CTTGAAACCAGTTGTAGGGGGTTCGAATCCTTCCTTTCTTATTTAACTTT592190.13298617113592634No Hit
GTTGTAGTTGTTTATTCACTATTTAAGGTTTTTTCCTTTTCCTAAAGAGC589200.13231471661677466No Hit
CGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTTCTAGTTAATTCA575930.1293347161254227No Hit
CTGAGAATAGTGGGAATCAGTGGACGAAGCCAGCTATGATGGCGAATACT562090.12622671259864712No Hit
GTGGGAATGCTATATCAGGGGCTCCAATTATTAGTGGTACAAGTCAGTTC559770.12570571778780035No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT535700.12030039662526511No Hit
GTCGGTTTGATGTCACTGTAGCTTGGTTTAGGCGGCCGGGGATTGCGTCG535410.12023527227390926No Hit
CAGTTTTCGAAATATTTTAGAGGCACTATTTCTAGTACAATGGGTATGAA500410.11237543676544504No Hit
CTCATCAATAGATAGAAACGTATAGGAATAGTCAAACTACATCTACGAAG497230.11166131456781885No Hit
GAAAAATGTTATGTTTACACCTACAAATATAATGGCAAAGTGGGCTTTTG495330.11123463778307367No Hit
CTTCGAATGTGTGGTAGGGTGGGGGGCATCCATGCAGTCATTCTAGGTTA493780.1108865593534131No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA482090.10826137429358605No Hit
GTAGGAATTGCGATAATTATAGTGGCAGATGTAAAGTAGGCTCGGGTGTC469380.10540713117036947No Hit
GGTTGATTCATGAAATTGTTTTTAGGTAGCTCGTTTGGTTTCGGGGTTCT463170.10401257178443912No Hit
CAGCTGAATACTTTTACGCCTGTAGGAATTGCGATAATTATAGTGGCAGA452590.1016366557935948No Hit
GTGTAAGCATCTGGATAATCAGAGTAACGACGAGGTATCCCCGCTAATCC450720.10121671601071398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)