FastQCFastQC Report
Sat 30 Sept 2023
ERR4882129_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR4882129_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48930695
Total Bases3.6 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2091350.4274106468342622No Hit
GTGGAATTAGTGTGTGTAAGTATGTATGTTGAGCTTGAACGCTTTCTTTA1465310.2994664187786419No Hit
GGGCAACCAGCTATCACCAAGCTCGATAGGCTTTTCACCTCTACCTAAAA1323850.27055614068020084No Hit
GCTCGTTTGGTTTCGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTT966830.1975917162018647No Hit
GGGGGTTCGAATCCTTCCTTTCTTATTTAACTTTTACGTAGGAAGGTTCT940670.1922453788976429No Hit
GGCAGATGTAAAGTAGGCTCGGGTGTCTACATCTAGGCCTACTGTGAATA896010.183118183790359No Hit
ATGAAATTGGCTTGAAACCAGTTGTAGGGGGTTCGAATCCTTCCTTTCTT848460.17340035738302922No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA822550.16810511275182174No Hit
GTTGGGTTAGTACCTATGATTCGATAATTGACAATGGTTATCCGGGTTGT814260.1664108797146658No Hit
CTCGTTTGGTTTCGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTT789230.16129548129246887No Hit
CGAAGAATCAGAATAGGTGTTGATAGAGAATTGGGTCTCCACCTCCAGCG769480.15725916012433505No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT763900.1561187716626547No Hit
CCGGGTTGTCATACACTTGTGCTAGGAGAATTGGTTCTTGTTACTCATAT735680.1503514307327946No Hit
CTGCTGAGTCCCGTGGGGGTGTGGCTAGGCAAGGCGTCTTGAGCTATATT731340.14946446192926546No Hit
GTACACTTCTGGGTGGCCGAAGAATCAGAATAGGTGTTGATAGAGAATTG679340.1388371859422802No Hit
GTCTGATATTGGGTTATAGCAGGGGGTTTTATATTAATGATAGTGGTGAT675400.138031965415574No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG661910.13527500477971957No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT631470.12905396091349203No Hit
GTGGGCTTTTGCTCATGTGTCATTTAGGGTATAGCCTGAGAATAGTGGGA609280.12451897525673813No Hit
CCGAAGAATCAGAATAGGTGTTGATAGAGAATTGGGTCTCCACCTCCAGC590500.1206808936599No Hit
CGTTGATCAATAATTGGGTCAATAAGATATTAGTATTACTTTGACTTGTG584180.11938927088609716No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT580630.11866375492929336No Hit
GTTGTAGTTGTTTATTCACTATTTAAGGTTTTTTCCTTTTCCTAAAGAGC567720.11602532929483221No Hit
CTCCTTTGTCCTTTAGTTTCATAAAGGGTTTCGTAATGTTCTCTGGGAAA565270.11552462109929156No Hit
CCCCAACCGAAATTTTTTAGTTCATATTTATTTTGTTTTAGCCCATTAGG558810.1142043864286007No Hit
CTCATCAATAGATAGAAACGTATAGGAATAGTCAAACTACATCTACGAAG558620.11416555599710979No Hit
CGGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTTCTAGTTAATTCA553590.11313757141606103No Hit
GGAGAATTGGTTCTTGTTACTCATATTAACAGTATTTCATCTATGGGTCT546010.11158844157026586No Hit
GGGGTTCTTAGCTTAAATTCTTTTTGTTAAGGATTTTCTAGTTAATTCAT531840.10869250886381239No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA526160.1075316833329263No Hit
TGGGCAACCAGCTATCACCAAGCTCGATAGGCTTTTCACCTCTACCTAAA525330.10736205565851865No Hit
GTCGGTTTGATGTCACTGTAGCTTGGTTTAGGCGGCCGGGGATTGCGTCG516220.10550023865387564No Hit
GCACGTTTTACGCCGAAAATAATTAGTTTGGGTTAATCGTATGACCGCGG512550.10475019821402495No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA512130.10466436252336085No Hit
GTGGAAGTGAGCTACTACATAGTATGTATCATGAAGTACAATGTCAAGGG512080.10465414398875797No Hit
CCTGAGAATAGTGGGAATCAGTGGACGAAGCCAGCTATGATGGCGAATAC498310.10183995955912746No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)