FastQCFastQC Report
Sat 1 Jul 2023
ERR599192_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR599192_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80612378
Total Bases4.1 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTA12894341.5995483968975586No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTAT11431841.4181246458205214No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGT10947241.3580098083696277No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTA9318991.1560246988371934No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGT9310231.1549380170871526No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTA7912750.9815800248443236No Hit
ACGGGCGTGGGGGTTCAAGTCCCCCCTCGGACACCAAAAAAAAAAAAAAA7281330.9032521035417166No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTATG4956620.6148708328639059No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTAT4803760.5959084844265481No Hit
TTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGT4225820.5242147800180265No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTAT4067190.5045366606106075No Hit
ATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTAT3768850.4675274558951728No Hit
TTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTA3618460.44887151201518954No Hit
CGGGCGTGGGGGTTCAAGTCCCCCCTCGGACACCAAAAAAAAAAAAAAAA2771930.34385910312681756No Hit
GCCGCCTTAGCTCAGTCGGTAGAGCGATTCACAAAAAAAAAAAAAAAAAA2748420.3409426775624954No Hit
ATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTATG2619100.32490047620230234No Hit
TGGTGGGGCTGCATGGGACCTTCGTTGGTAAAAAAAAAAAAAAAAAAAAT2428850.3012998822587767No Hit
GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCAAAAAAAAAAAAAAAAAAA2117400.2626643764311233No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAAATCGT2104230.26103063229321927No Hit
TATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAAATCGTAT2061540.2557349195181911No Hit
GGTGCGGCTGGATCACCTCCTTTCTAAAAAAAAAAAAAAAAAAAATCGTA2031040.2519513814615418No Hit
TCCTTGGGATCCGTGCCGTAGCTAACGCAAAAAAAAAAAAAAAAAAAATC2024920.2511921928416502No Hit
TCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTATG1960490.24319962376001364No Hit
TTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTAT1881560.23340832347111756No Hit
TCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTATGC1872900.2323340467638853No Hit
GGGGCTATGGCGCAGTTGGTAGCGCGACTCGAAAAAAAAAAAAAAAAAAA1836330.22779752260874875No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAAATCG1812020.2247818567019571No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAATCGTATGC1810370.22457717349561376No Hit
GTATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAAATCGTA1719830.21334564773662926No Hit
ATATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAAATCGTA1667540.20685905085196715No Hit
GGGCGAGTGGCGGAATGGCAGACGCGCTGGCAAAAAAAAAAAAAAAAAAA1643040.20381981536383903No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAAATCG1538260.19082181150889757No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAATCGTATG1519680.18851695455504364No Hit
ATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTATGC1412360.17520386261276152No Hit
TCCTTGGGATCCGTGCCGTAGCTAACGCAAAAAAAAAAAAAAAAAAATCG1399380.17359368805619405No Hit
TCGGGCGTGGGGGTTCAAGTCCCCCCTCGGACACCAAAAAAAAAAAAAAA1315310.1631647685669315No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAATCGTATG1284290.15931672428767701No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGAA1279970.15878082643834177No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTT1276950.15840619414551943No Hit
TGGTGGGGCTGCATGGGACCTTCGTTGGTAAAAAAAAAAAAAAAAAAATC1254750.15565227464199108No Hit
GCCGCCTTAGCTCAGTCGGTAGAGCGATTCAAAAAAAAAAAAAAAAAAAA1163820.14437236921605265No Hit
GTATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAATCGTAT1160990.14402130650456685No Hit
GGTGCGGCTGGATCACCTCCTTTCTAAAAAAAAAAAAAAAAAAATCGTAT1134560.14074265369023103No Hit
ATATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAATCGTAT1115750.13840926513791715No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTATC1102170.13672466032449757No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGA1095830.13593818061042684No Hit
AACGGGCGTGGGGGTTCAAGTCCCCCCTCGGACACCAAAAAAAAAAAAAA1077940.13371891845195286No Hit
TCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAATCGTATGCC1072160.1330019069776108No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATGGT1029940.12776449790378347No Hit
TGGTGGGGCTGCATGGGACCTTCGTTGGTAGTAAAAAAAAAAAAAAAAAA1018510.1263466015107506No Hit
ACGGGTTGATATTCCCGTACCCGTGTATGTGCGTCCAAAAAAAAAAAAAA999090.12393754219730375No Hit
TATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAATCGTATG977240.12122704034360579No Hit
GGAGGCGTGCCAGAGCGGCCGAATGGGACTCAAAAAAAAAAAAAAAAAAA921880.11435960864471706No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGAAT904670.11222470077734215No Hit
CATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTA902350.11193690378418064No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATGGT882800.10951171791508246No Hit
GTATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGA874130.10843620070356937No Hit
TATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTTT868630.10775392334909162No Hit
ACGGGGGCCCGCACAAGCGGCGGAGCATGTGGAAAAAAAAAAAAAAAAAA867840.107655923510903No Hit
TCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAAATCGTATC855860.10616979938242238No Hit
ATATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGAA852670.1057740785168253No Hit
TCCGGGTGGAAAAGTAGGACACCGCCGAACACAAAAAAAAAAAAAAAAAA842190.10447403003047498No Hit
ATGCACAGGACGCCGGCAGAGATGTCGGTTCCCTAAAAAAAAAAAAAAAA841090.10433757455957943No Hit
GCGGGCGTGGGGGTTCAAGTCCCCCCTCGGACACCAAAAAAAAAAAAAAA810120.1004957328017293No Hit
ATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTATC809990.10047960624607799No Hit
TTATCCTGAGAGGTGATGCATAGCCAAAAAAAAAAAAAAAAAAAATCGTA807010.10010993597037914No Hit
CATCCTGAGAGGTGATGCATAGCCGAAAAAAAAAAAAAAAAAAATCGTAT806610.1000603157991444No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)