FastQCFastQC Report
Tue 27 Jun 2023
ERR618768_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR618768_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204609482
Total Bases5.1 Gbp
Sequences flagged as poor quality0
Sequence length25
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTAAGCGACTAAGCGTACACGGT8551770.41795570353870504No Hit
CGGTGGTTCAAGTCCACTCAGGCCT7249720.35431984525526533No Hit
CGGAGGTTCGAATCCTCCCGGATGC5731700.28012875766920714No Hit
CACAGGTTCGAATCCCGTCGTAGCC5033750.24601743530145878No Hit
AAGGCTGAGGCGTGATGACGAGGCA4636830.22661852982942404No Hit
CGCAGGTTCGAATCCTGCACGACCC4031890.19705294009785917No Hit
GTGAAACGCCGTAGCGCCGATGGTA4012280.19609452899157429No Hit
TCGCGAGTTCGAGTCTCGTTTCCCG3669020.17931818037641092No Hit
TGCCTGGCGGCCGTAGCGCGGTGGT3381460.16526409074238307No Hit
TTGAAAAATTAGCGGATGACTTGTG3352240.16383600443306923No Hit
TGTTAGTGTCCTTACGGACGTGGGG3305890.16157071352147795No Hit
GAAACGCCGTAGCGCCGATGGTAGT3140210.15347333707633354No Hit
CCTTGGTTCGATTCCGAGTCCGGGC3070510.15006684783063964No Hit
GCCGAACTCAGAAGTGAAACGCCGT2993320.14629429539340705No Hit
ATGCCGAACTCAGAAGTGAAACGCC2659950.13000130658656375No Hit
GTCTCCCCATGCGAGAGTAGGGAAC2651010.12956437668905296No Hit
GAAGTGAAACGCCGTAGCGCCGATG2421170.11833127068861843No Hit
TCTGCGGTTCGATCCCGCATAGCTC2352340.11496730146650778No Hit
AGAATACCTGCCTGTCACGCAGGGG2333770.11405971889416151No Hit
TGCCTGGCGGCAGTAGCGCGGTGGT2318960.11333590102143946No Hit
TGACCCCATGCCGAACTCAGAAGTG2287330.11179002935944092No Hit
AGAAGTGAAACGCCGTAGCGCCGAT2171670.10613730990238274No Hit
TCGGCGGTTCGATCCCGTCATCACC2141280.10465204149238794No Hit
TCGCGGGTTCGAGTCCCGTCCGTTC2140560.10461685250735349No Hit
AGAGCACGACCTTGCCAAGGTCGGG2108910.10307000337354845No Hit
CATGCCGAACTCAGAAGTGAAACGC2108060.1030284608217717No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)