FastQCFastQC Report
Tue 27 Jun 2023
ERR618773_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR618773_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94444604
Total Bases4.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAAAAAAAAAAAAAAAAAAA1260630.13347824508851772No Hit
CGGTGGTTCAAGTCCACTCAGGCCTACCAAAAAAAAAAAAAAAAAAAATC1198250.1268733150704936No Hit
TCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAAAAAAAAAAAAAAAAAAT1126910.11931968077286872No Hit
TCGCGGGTTCGAGTCCCGTCCGTTCCGCCAAAAAAAAAAAAAAAAAAAAA997180.10558358633172944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)