FastQCFastQC Report
Thu 29 Jun 2023
ERR618774_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR618774_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences188584261
Total Bases4.7 Gbp
Sequences flagged as poor quality0
Sequence length25
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTAAGCGACTAAGCGTACACGGT7999460.424184921773509No Hit
CGGTGGTTCAAGTCCACTCAGGCCT7105640.37678860167445255No Hit
CACAGGTTCGAATCCCGTCGTAGCC4899160.2597862607420881No Hit
CGGAGGTTCGAATCCTCCCGGATGC4388940.23273098066227274No Hit
GTGAAACGCCGTAGCGCCGATGGTA4099880.2174030843432899No Hit
TCGCGAGTTCGAGTCTCGTTTCCCG3946680.20927939474227916No Hit
TGCCTGGCGGCCGTAGCGCGGTGGT3397800.18017410265218264No Hit
CGCAGGTTCGAATCCTGCACGACCC3352430.17776828152164828No Hit
TTGAAAAATTAGCGGATGACTTGTG3178880.1685654986870829No Hit
GCCGAACTCAGAAGTGAAACGCCGT3172230.16821287116850117No Hit
GAAACGCCGTAGCGCCGATGGTAGT2872940.15234251176454222No Hit
GTCTCCCCATGCGAGAGTAGGGAAC2822230.14965352808525204No Hit
CCTTGGTTCGATTCCGAGTCCGGGC2820960.1495861841832071No Hit
GAAGTGAAACGCCGTAGCGCCGATG2677210.14196359684544407No Hit
TGCCTGGCGGCAGTAGCGCGGTGGT2647680.14039771855616306No Hit
TCGGCGGTTCGATCCCGTCATCACC2386930.12657100795914245No Hit
TGACCCCATGCCGAACTCAGAAGTG2350290.1246281098717989No Hit
TCGCGGGTTCGAGTCCCGTCCGTTC2314060.12270695272920999No Hit
TGTTAGTGTCCTTACGGACGTGGGG2232470.11838050472303199No Hit
GGTCTCCCCATGCGAGAGTAGGGAA2205810.11696681304703366No Hit
TCTCCCCATGCGAGAGTAGGGAACT2090100.11083109422371148No Hit
GTGTGGGGTCTCCCCATGCGAGAGT2081260.11036233824412314No Hit
GTGGGGTCTCCCCATGCGAGAGTAG2027740.10752434955322172No Hit
TCTGCGGTTCGATCCCGCATAGCTC2000340.10607141812327595No Hit
CATGCCGAACTCAGAAGTGAAACGC1995450.10581211758705568No Hit
ATGCCGAACTCAGAAGTGAAACGCC1935430.10262945538175108No Hit
GGGTCTCCCCATGCGAGAGTAGGGA1919540.10178686120577156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)