FastQCFastQC Report
Mon 25 Sept 2023
SRR014369.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014369.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4588611
Total Bases165.1 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA46846910.209385803241982No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA3712968.091686133341875No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA2707175.8997592081786845No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2480505.405775298886744No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA1772413.862628581939066No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA1551253.380652663736368No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA1491093.249545450682134No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA1047742.2833489262872795No Hit
CACGTTCTAGCATTCAAGGTCCCAAAAAAAAAAAAA1028962.242421508382384No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA813671.7732381324108755No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA510711.1129947602880261No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA450470.9817132025355821No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA430390.9379526832847673No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA374550.8162600839338964No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA368730.8035765071390885No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA363960.7931812045082923No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA301360.656756478158641No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA299060.6517440680850916No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA255310.5563993112512697No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA252310.5498613850683791No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA240440.5239929904714085No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA202430.441157465734184No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA197800.4310672663252562No Hit
CACGTTCTAGCATTCAAGGTCTCAAAAAAAAAAAAA194810.42455113322964183No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA193710.4221538936292486No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA192460.4194297577197108No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA188150.41003693710362465No Hit
ACGTTCTAGCATTCAAGGTCCCAAAAAAAAAAAAAA184380.4018209432004587No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA165200.3600218018045112No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA156350.34073491956498386No Hit
AGATGGATACGAATAAGGCGTCCAAAAAAAAAAAAA147270.3209467963181015No Hit
CCACGTTCTAGCATTCAAGGTCCCAAAAAAAAAAAA139330.30364308502071763No Hit
ATGTATTTATTAGATAAAAAATCAAAAAAAAAAAAA129510.28224227331538887No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA128580.2802155161986928No Hit
ATAGATGGATACGAATAAGGCGTCAAAAAAAAAAAA118850.25901084227885085No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA113540.24743871293513442No Hit
CAAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA112350.24484533554925444No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA112310.24475816320014923No Hit
GTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAAA107170.23355651634012994No Hit
ATATAGATGGATACGAATAAGGCGTCCAAAAAAAAA104950.22871845096479088No Hit
CACGTTCTAGCATTCAAGGTCCCGAAAAAAAAAAAA96640.21060839543818377No Hit
AAGAGGTGCACAATCGACCGATCCTGAGAAAAAAAA94140.2051601236191083No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA91840.2001477135455588No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA91240.19884012830898068No Hit
CACGTTCTAGCATTCAAGGTCCCTAAAAAAAAAAAA90940.19818633569069158No Hit
AATATAGATGGATACGAATAAGGCGTCAAAAAAAAA82780.18040317647322904No Hit
CACGTTCTAGCATTCAAGGTCCTAAAAAAAAAAAAA82140.1790084188875457No Hit
AAGAGGTGCACAATCGACCGATCCTGTAAAAAAAAA75110.16368787853230532No Hit
CAAGAGGTGCACAATCGACCGATCCTAAAAAAAAAA74130.1615521559792277No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA74010.16129063893191206No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA73050.15919850255338708No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA67910.14799685569336776No Hit
AGGTGCACAATCGACCGATCCTGAAAAAAAAAAAAA67150.14634058106036882No Hit
AATATATTAGCATGGAATAATAGAATAAAAAAAAAA66610.1451637543474485No Hit
AGAGGTGCACAATCGACCGATCCTGAGAAAAAAAAA63200.13773231158622948No Hit
CACGTTCTAGCATTCAAGGTCCAAAAAAAAAAAAAA61900.13489921024031018No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA59770.13025728265045783No Hit
ATAGATGGATACGAATAAGGCGTCCAAAAAAAAAAA58350.12716266425722295No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAGAAAAAAA55870.12175797861270002No Hit
AGATTAAGCCTTTGTTGTCTGATTTGTAAAAAAAAA55580.12112597908168724No Hit
AATATAGATGGATACGAATAAGGCGTCCAAAAAAAA55010.11988377310693803No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAAA54890.1196222560596224No Hit
AAGAGGTGCACAATCGACCGATCCTGAAGAAAAAAA53470.1165276376663875No Hit
AAATCAGTTATCGTTTATTTGATAGTTAAAAAAAAA52470.11434832893875728No Hit
CACGTTCTAGCATTCAAGGTCACAAAAAAAAAAAAA51120.11140626215645649No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA49470.10781040275586663No Hit
AAGCCTTTGTTGTCTGATTTGTAAAAAAAAAAAAAA49200.10722198939940648No Hit
AATTAGAGTGTTCAAAGCAGGCGTAAAAAAAAAAAA47870.1043235087916583No Hit
CAAGAGGTGCACAATCGACCGATCCCGAAAAAAAAA47670.10388764704613226No Hit
AGAGGTGCACAATCGACCGATCCTGTAAAAAAAAAA46930.1022749585876859No Hit
AAAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA46350.10101095952566037No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)