FastQCFastQC Report
Mon 25 Sept 2023
SRR014370.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014370.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4323096
Total Bases155.6 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA45791010.592177458006947No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA45603210.548736368565491No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA3027247.002481554885666No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA2608246.0332687499884345No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA1308143.025933266344305No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA1154612.6707942641107207No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA1041272.4086210438074933No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA1001542.316719314121176No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA875302.024706367843786No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA727271.6822897293976353No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA720501.6666296561538305No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA543801.2578948050193657No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA533331.2336760506821964No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA478901.1077709123276467No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA395620.915131193015376No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA326100.7543205147422125No Hit
AGTTTCTTTACTTATTAAATGAAGCGAAAAAAAAAA320620.7416444140958239No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA268020.6199723531469113No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA217080.5021401329047516No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA209660.48497650757697724No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA201900.4670264088514343No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA196810.45525243945542737No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA186530.43147318495818743No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA179400.4149803751755686No Hit
AGTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA175880.406838062351611No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA148400.3432725065554871No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA133950.30984738715032No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA129040.29848978602372No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA123290.285189132973221No Hit
AGTTTCTTTACTTATTCAATGAAAAAAAAAAAAAAA121250.2804702925866092No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA117150.27098634867234034No Hit
AGTTTCTTTACTTATTAAATGAAGCGGAAAAAAAAA111040.2568529590830275No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA104720.24223380651273996No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA101280.23427654625296315No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA95160.2201200250931277No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA90580.20952576579377374No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA84750.1960400601790939No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA84560.19560056033916434No Hit
AAAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA69220.1601167311574853No Hit
AGTTTCTTTACTTATTTAATGAAGCGAAAAAAAAAA65180.15077157666635208No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA57670.13339976720387425No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA57020.1318962151199048No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA53100.12282863947504288No Hit
AGTTTTCTTTACTTATTCAATGAAGCGAAAAAAAAA52060.12042295614069178No Hit
AGGTGCACAATCGACCGATCCTGAAAAAAAAAAAAA51730.11965961431344573No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA49200.11380732697122617No Hit
AAAGAGGTGCACAATCGACCGATCCTAAAAAAAAAA48020.11107780164955855No Hit
AGTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA44450.10281983097298789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)