FastQCFastQC Report
Mon 25 Sept 2023
SRR014371.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014371.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4223635
Total Bases152 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA45885310.863935922493303No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA45789810.841325067151873No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA3012287.131960976741598No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA2618556.199754476890167No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA1302013.082676414983776No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA1143212.7066969565315184No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA1004422.3780937509988433No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA961072.275457041150573No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA880772.0853364459760373No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA743211.7596454239061852No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA680251.6105795126709577No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA553011.309322420142839No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA532551.2608807342490531No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA458891.0864811945160981No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA376750.8920041622914858No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA330440.7823592711017879No Hit
AGTTTCTTTACTTATTAAATGAAGCGAAAAAAAAAA306690.7261280863521588No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA270930.641461679335454No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA218380.5170427842368008No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA207010.49012284442192566No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA202770.4800840981760971No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA202640.4797763064279939No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA175350.41516371561463056No Hit
AGTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA170370.4033729240334451No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA166710.39470740250992337No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA141260.3344512487466365No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA126630.2998128389408649No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA124890.2956931647739447No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA124000.29358597511385337No Hit
AGTTTCTTTACTTATTCAATGAAAAAAAAAAAAAAA116950.27689419185133185No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA112220.26569530747803727No Hit
AGTTTCTTTACTTATTAAATGAAGCGGAAAAAAAAA106150.2513238004704479No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA106110.2512290953171853No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA103420.24486017376027994No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA91210.21595142572689166No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA83300.19722348166922565No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA80900.1915411724734737No Hit
AAAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA69210.16386359143249832No Hit
AGTTTCTTTACTTATTTAATGAAGCGAAAAAAAAAA63130.14946840813659323No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA56410.13355794238848764No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA53950.12773357546284184No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA51700.12240641059182433No Hit
AGGTGCACAATCGACCGATCCTGAAAAAAAAAAAAA49850.11802629725343218No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA49460.11710292200912248No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA48700.11530352409713433No Hit
AGTTTTCTTTACTTATTCAATGAAGCGAAAAAAAAA48310.11438014885282463No Hit
AAAGAGGTGCACAATCGACCGATCCTAAAAAAAAAA47580.1126517798057834No Hit
AGTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA43320.10256568098332361No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)