FastQCFastQC Report
Mon 25 Sept 2023
SRR014375.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014375.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4737798
Total Bases170.5 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA4468699.431997733968396No Hit
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA4392509.271184630497121No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA2721175.743533177227058No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA2097214.426550055532127No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1997224.215502644899593No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA1978584.1761594732405225No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA1731103.6538071061704196No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA738471.558677681066183No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA580201.2246195384438088No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA558641.1791131660741974No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA557911.177572365896562No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA552901.1669978331705995No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA483681.020896205367979No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA480461.014099799104985No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA430260.908143403327875No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA389550.8222174098600236No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA359200.7581581148035438No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA353220.7455362174579837No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA348880.7363758437991658No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA308910.6520117573606979No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA303510.6406140574165466No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA303460.6405085231578045No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA263700.5565876806060537No Hit
CACGTTCTAGCATTCAAGGTCCCAAAAAAAAAAAAA238130.5026174606853226No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA236030.4981850218181526No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA225390.47572733155782493No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA186360.3933472891837094No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA185590.3917220615990804No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA154970.327092881545393No Hit
AGATGGATACGAATAAGGCGTCCAAAAAAAAAAAAA143310.30248229240672564No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA140610.29678344243465No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA135200.2853646356387503No Hit
ATAGATGGATACGAATAAGGCGTCAAAAAAAAAAAA129750.2738614014358569No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA124980.2637934331518566No Hit
AATATAGATGGATACGAATAAGGCGTCAAAAAAAAA124060.2618516027910012No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA102780.21693622227034584No Hit
ATATAGATGGATACGAATAAGGCGTCCAAAAAAAAA97310.20539077436395559No Hit
AAGAGGTGCACAATCGACCGATCCTGAGAAAAAAAA94780.20005074087160324No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA93600.19756013236528872No Hit
AGAGGTGCACAATCGACCGATCCTGAGAAAAAAAAA87940.18561365427567827No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA84940.1792815987511498No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAAA69800.1473258252040294No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA64900.13698346784729953No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA63380.13377522638153844No Hit
AATATATTAGCATGGAATAATAGAATAAAAAAAAAA62270.1314323658374629No Hit
AAGAGGTGCACAATCGACCGATCCTGTAAAAAAAAA59930.12649336252833066No Hit
AATATAGATGGATACGAATAAGGCGTCCAAAAAAAA58360.12317958680382743No Hit
AAATATAGATGGATACGAATAAGGCGTCCAAAAAAA57500.12136439755346261No Hit
AGAGGTGCACAATCGACCGATCCTGTAAAAAAAAAA53640.1132171527785693No Hit
CACGTTCTAGCATTCAAGGTCTCAAAAAAAAAAAAA49310.10407788597149985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)