FastQCFastQC Report
Mon 25 Sept 2023
SRR014376.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014376.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4221683
Total Bases151.9 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA43459210.294283109366573No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA42895210.16068710038153No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA2557696.0584605712934865No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA1935044.583574844440002No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA1808954.284902490310144No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA1562423.7009410701845686No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA694971.646191814970475No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA543951.2884671824009524No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA538911.276528815640587No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA502261.1897150970359451No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA491061.1631853931240217No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA423171.0023727503936226No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA408460.9675288267735878No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA408310.9671735182390531No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA359190.8508218167967609No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA332890.7885243870750125No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA305360.7233134273700796No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA299170.7086510285116149No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA293610.6954809254981958No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA283550.6716515664487362No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA252250.597510518909165No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA250420.5931757547878417No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA246140.5830376179357853No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA216900.5137761409371571No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA214440.5079490809707882No Hit
CACGTTCTAGCATTCAAGGTCCCAAAAAAAAAAAAA200060.4738868361267296No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA179490.42516219242420616No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA171010.40507541660517854No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA166080.3933976094368052No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA163330.3868836196370026No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA146510.3470416892978464No Hit
AGATGGATACGAATAAGGCGTCCAAAAAAAAAAAAA131190.31075284430403705No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA120150.2846021361622841No Hit
ATAGATGGATACGAATAAGGCGTCAAAAAAAAAAAA118440.28055161886858865No Hit
AATATAGATGGATACGAATAAGGCGTCAAAAAAAAA115950.2746534971953129No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA104070.24651306126016567No Hit
AAGAGGTGCACAATCGACCGATCCTGAGAAAAAAAA100140.23720397765535686No Hit
ATATAGATGGATACGAATAAGGCGTCCAAAAAAAAA89630.21230869300229316No Hit
AGAGGTGCACAATCGACCGATCCTGAGAAAAAAAAA88590.209845220496186No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA83600.19802528991399873No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA79360.18798190200448495No Hit
AATATATTAGCATGGAATAATAGAATAAAAAAAAAA63230.1497743909241883No Hit
AAGAGGTGCACAATCGACCGATCCTGTAAAAAAAAA62830.14882690149876246No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAAA59100.1399915626066666No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA55930.13248270891016686No Hit
AGAGGTGCACAATCGACCGATCCTGTAAAAAAAAAA55900.13241164720325993No Hit
AAATATAGATGGATACGAATAAGGCGTCCAAAAAAA55830.13224583655381042No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA55300.1309904130651212No Hit
AATATAGATGGATACGAATAAGGCGTCCAAAAAAAA54790.12978236404770327No Hit
AAGAGGTGCACAATCGACCGATCCTGAAGAAAAAAA47310.1120643117922402No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA43590.10325266013577997No Hit
AGAGGTGCACAATCGACCGATCCTGAAGAAAAAAAA43070.10202092388272639No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)