FastQCFastQC Report
Mon 25 Sept 2023
SRR014377.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014377.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4237384
Total Bases152.5 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA3851209.088626378916803No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA2190305.168991056746332No Hit
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA1904124.493621536306363No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA1230412.903701906648064No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA1042112.459323960254723No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA964092.2752009258542536No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA795891.878257906293128No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA758881.7909162823100289No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA727831.717639940113995No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA670021.581211426672683No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA621951.4677687931988226No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA517571.2214375661965025No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA483441.140892588446079No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA383370.9047327313266864No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA368610.8698999193842238No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA351480.8294740339794552No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA345510.8153851527263047No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA324870.7666758547254627No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA292330.6898831920826624No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA273860.6462949782224127No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA255470.6028955600908485No Hit
AGAGGTGCACAATCGACCGATCCTGTAAAAAAAAAA240770.5682043449449No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA214860.5070581283169049No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA214650.5065625395291057No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA187030.44138081420045955No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA181230.4276931238707655No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA165760.39118474983621976No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA164650.3885652091007093No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA137400.3242566640172333No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA133010.31389649840562006No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA127730.30143598031238145No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA125950.2972352753491305No Hit
AGTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA122940.29013183605734105No Hit
AAGAGGTGCACAATCGACCGATCCTGTAAAAAAAAA122130.28822027930440103No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAAA110720.26129328850064093No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA108320.25562941664007793No Hit
TTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA107650.2540482524123374No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA103920.24524565156237907No Hit
AGAGGTGCACAATCGACCGATCCTGAGAAAAAAAAA100630.23748142722019058No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA88150.2080292935452628No Hit
AGATGGATACGAATAAGGCGTAAAAAAAAAAAAAAA87450.2063773309192653No Hit
TTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAA85190.20104385158390176No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA79350.18726176338986505No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA78930.18627058581426653No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA67510.1593199955444208No Hit
AGATGGATACGAATAAGGCGTCTAAAAAAAAAAAAA66610.15719604359670966No Hit
GTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA65830.15535528524202669No Hit
AGATGGATACGAATAAGGCGTCGAAAAAAAAAAAAA64530.15228735465088838No Hit
AGAGGTGCACAATCGACCGATCCTGATAAAAAAAAA64120.15131977654137554No Hit
AGTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA63640.15018700216926292No Hit
AGATGGATACGAATAAGGCGACAAAAAAAAAAAAAA60820.14353195273310138No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA60100.14183279117493244No Hit
AAGAGGTGCACAATCGACCGATCCTGAGAAAAAAAA56830.13411576576491535No Hit
AGAGGTGCACAATCGACCGATCCTGAAGAAAAAAAA55000.129797063471236No Hit
AGATGGATACGAATAAGGCGGCAAAAAAAAAAAAAA53150.12543116224538536No Hit
AATATATTAGCATGGAATAATAGAATAAAAAAAAAA48340.11407981905817363No Hit
GTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAA47160.11129508206006347No Hit
AAGCCTTTGTTGTCTGATTTGTAAAAAAAAAAAAAA46840.11053989914532174No Hit
AGATGGATACGAATAAGGCGTCCAAAAAAAAAAAAA46190.10900593384975257No Hit
AGAGGTGCACAATCGACCGATCCTGAAACAAAAAAA45580.10756636641852614No Hit
TTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAAA45040.10629199524989946No Hit
AGATGGATACGAATAAGGCGTTAAAAAAAAAAAAAA44850.10584360539427155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)