FastQCFastQC Report
Mon 25 Sept 2023
SRR014378.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014378.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4211315
Total Bases151.6 Mbp
Sequences flagged as poor quality0
Sequence length36
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAAA4018559.542268863763455No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAAA2287535.43186629354489No Hit
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA2001694.7531234305674115No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA1290263.0637936131588352No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAAA1094852.599781778375638No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAAA1024312.4322806534301042No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAAA833811.9799278847580863No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA783601.860701467356396No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAAA758631.8014088236097274No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA693661.6471339712180164No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA651741.547592616558011No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAAA540991.2846106263720478No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA505781.2010025372122484No Hit
AGAGGTGCACAATCGACCGATCCTTAAAAAAAAAAA405920.9638794533298982No Hit
AAGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA387460.9200451640402106No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA373970.8880124141746699No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAAA363190.8624147089448309No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAAA343860.8165145566171137No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAAA302380.7180180062522039No Hit
AAGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA288500.6850591798523739No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA271200.6439793746133927No Hit
AGAGGTGCACAATCGACCGATCCTGTAAAAAAAAAA250250.5942324428355514No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAAA231630.5500182247112837No Hit
AAGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA229220.5442955466404199No Hit
AAGAGGTGCACAATCGACCGATCCTTAAAAAAAAAA192110.45617580256998114No Hit
AAGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA191850.45555841821378834No Hit
AAGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA171660.40761614840020277No Hit
ACTTATTCAATGAAGCGGAGAAAAAAAAAAAAAAAA140730.33417115556542315No Hit
CTTTACTTATTCAATGAAGCGGAGAAAAAAAAAAAA134050.3183091267217009No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAAA132660.3150084949712857No Hit
AAGAGGTGCACAATCGACCGATCCTGTAAAAAAAAA125680.29843409956272565No Hit
AGTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA125160.29719933085034006No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAAA124430.2954659055425681No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA116880.27753801366081615No Hit
AAGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA116000.2754484050706252No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAAA114510.27191031779859737No Hit
ATATAGATGGATACGAATAAGGCGTCAAAAAAAAAA109470.2599425595093219No Hit
AGAGGTGCACAATCGACCGATCCTGAGAAAAAAAAA106710.25338878711281393No Hit
AAATATAGATGGATACGAATAAGGCGTCAAAAAAAA92450.21952762973085604No Hit
AGATGGATACGAATAAGGCGTAAAAAAAAAAAAAAA90690.21534841255047413No Hit
TTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA89020.2113829053395436No Hit
CTTTACTTATTCAATGAAGCGGAAAAAAAAAAAAAA82760.19651818968659435No Hit
AAGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA80850.19198278922379353No Hit
TTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAA71010.1686171658971129No Hit
AGATGGATACGAATAAGGCGTCTAAAAAAAAAAAAA68040.16156473690521844No Hit
AGATGGATACGAATAAGGCGTCGAAAAAAAAAAAAA66510.15793166742454554No Hit
ATATATTAGCATGGAATAATAGAATAAAAAAAAAAA66480.15786043076806175No Hit
AGAGGTGCACAATCGACCGATCCTGATAAAAAAAAA65590.15574707662570955No Hit
AGTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA64640.15349124917038978No Hit
AGATGGATACGAATAAGGCGACAAAAAAAAAAAAAA64530.1532300480966159No Hit
CTTTACTTATTCAATGAAGCGAAAAAAAAAAAAAAA63440.1506417829110385No Hit
AGAGGTGCACAATCGACCGATCCTGAAGAAAAAAAA59670.14168970974624318No Hit
AAGAGGTGCACAATCGACCGATCCTGAGAAAAAAAA58310.13846031465231168No Hit
AGATGGATACGAATAAGGCGGCAAAAAAAAAAAAAA56240.1335449853549307No Hit
AGATGGATACGAATAAGGCGTCCAAAAAAAAAAAAA48080.1141686147913419No Hit
AAGCCTTTGTTGTCTGATTTGTAAAAAAAAAAAAAA47760.11340875712218156No Hit
AATATATTAGCATGGAATAATAGAATAAAAAAAAAA47700.113266283809214No Hit
AGATGGATACGAATAAGGCGTTAAAAAAAAAAAAAA47160.1119840239925059No Hit
GTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA46500.11041681754986268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)