FastQCFastQC Report
Mon 25 Sept 2023
SRR014379.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014379.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4758893
Total Bases166.5 Mbp
Sequences flagged as poor quality0
Sequence length35
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA415840.8738166628247368No Hit
TTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA348710.7327544452039582No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA287850.6048675605860439No Hit
GTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA277550.5832238716020722No Hit
GTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA204960.43068839749076093No Hit
TTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAA190100.3994626481410698No Hit
TTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA139090.29227385444472065No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA137750.28945807354777675No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA127300.26749918520966953No Hit
TTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA125390.2634856467670107No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAA123910.26037567980620707No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAA121100.25447094523873515No Hit
GTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA95170.1999834835538433No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA93780.19706263620552092No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA91280.19180931363659573No Hit
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA85270.17918032618089963No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAA72380.1520941950155215No Hit
TTTCTTTACTTATTCAATGAAGCGGAAAAAAAAAA69290.14560108832032995No Hit
GTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA65150.13690158614618989No Hit
TTCTTTACTTATTCAATGAAGCGAAAAAAAAAAAA59680.1254073163653816No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAA59180.12435665185159658No Hit
TTCTTTACTTATTCAATGAAGCAAAAAAAAAAAAA58710.12336902720863865No Hit
TCTTTACTTATTCAATGAAGCGGAAAAAAAAAAAA57090.11996487418397513No Hit
TTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA55790.11723314644813405No Hit
TTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA54800.11515283071083969No Hit
TCTTTACTTATTCAATGAAGCGGAGAAAAAAAAAA53340.1120848903305874No Hit
TTTTCTTTACTTATTCAATGAAGCAAAACAAAAAA53270.11193779729865748No Hit
AGATGGATACGAATAAGGCGCCAAAAAAAAAAAAA52140.10956329549750331No Hit
AGAGGTGCACAATCGACCGATCCTGAAACAAAAAA51510.10823945821013417No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)