FastQCFastQC Report
Tue 26 Sept 2023
SRR014381.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR014381.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5468170
Total Bases191.3 Mbp
Sequences flagged as poor quality0
Sequence length35
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAA930331.7013552980247506No Hit
TTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA852351.5587481735205746No Hit
TTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA730011.3350170166618813No Hit
GTTTCTTTACTTATTCAATGAAGCAAAAAAAAAAA536900.9818641337046945No Hit
AGAGGTGCACAATCGACCGATCCTAAAAAAAAAAA430300.7869177439618739No Hit
GTTTCTTTACTTATTCAATGAAGCGAAAAAAAAAA407060.7444172364794803No Hit
TTTCTTTACTTATTCAATGAAGCGAAAAAAAAAAA402150.7354379984528645No Hit
AAGAGGTGCACAATCGACCGATCCTGAAAAAAAAA345630.632076179050761No Hit
TTTCTTTACTTATTCAATGAAGCAAAAAAAAAAAA288440.5274890868425818No Hit
AGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA254940.46622544653878717No Hit
AGAGGTGCACAATCGACCGATCCCGAAAAAAAAAA254250.46496359842506724No Hit
TTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA250610.4583068924338489No Hit
AGATGGATACGAATAAGGCGTCAAAAAAAAAAAAA238590.43632513253977107No Hit
AGTTTCTTTACTTATTCAATGAAGCGAAAAAAAAA236340.4322104104298148No Hit
AGAGGTGCACAATCGACCGATCCAAAAAAAAAAAA231710.42374322671021564No Hit
GTTTCTTTACTTATTCAATGAAGCGGAAAAAAAAA185870.3399126215900384No Hit
AAGAGGTGCACAATCGACCGATCCTAAAAAAAAAA157500.2880305476969443No Hit
TTTCTTTACTTATTCAATGAAGCGGAAAAAAAAAA138300.2529182523586501No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAAAAAAAA132160.24168963291192483No Hit
GTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA124310.22733382466163268No Hit
AAGAGGTGCACAATCGACCGATCCCGAAAAAAAAA120290.21998218782517737No Hit
TTCTTTACTTATTCAATGAAGCAAAAAAAAAAAAA120150.21972616067166892No Hit
TTCTTTACTTATTCAATGAAGCGAAAAAAAAAAAA119840.21915924340318607No Hit
TTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA115160.21060062141447689No Hit
AGAGGTGCACAATCGACCGATCCCAAAAAAAAAAA114770.2098874029154178No Hit
TCTTTACTTATTCAATGAAGCGGAAAAAAAAAAAA112680.20606528326661389No Hit
TTTTCTTTACTTATTCAATGAAGCGGAGAAAAAAA110370.20184083523372537No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAGAAAAAA104160.19048420221024584No Hit
TCTTTACTTATTCAATGAAGCGGAGAAAAAAAAAA102280.18704612329170453No Hit
AGAGGTGCACAATCGACCGATCCTGAAACAAAAAA102000.18653406898468775No Hit
AGAGGTGCACAATCGACCGATCCAGAAAAAAAAAA94240.17234284961879384No Hit
AAGAGGTGCACAATCGACCGATCCAAAAAAAAAAA93110.17027634473690467No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAACA92820.16974600277606586No Hit
TTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA92450.1690693595846508No Hit
AGAGGTGCACAATCGACCGATCCGAAAAAAAAAAA87760.16049244994211959No Hit
GTTTCTTTACTTATTCAATGAAGCGTAAAAAAAAA82420.15072684280115653No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAACAA82170.1502696514556058No Hit
AGAGGTGCACAATCGACCGATCCTGCAAAAAAAAA80050.14639266884533583No Hit
TCTTTACTTATTCAATGAAGCGAAAAAAAAAAAAA78790.14408842446376027No Hit
TTTTCTTTACTTATTCAATGAAGCAAAACAAAAAA73030.133554735862272No Hit
AGAGGTGCACAATCGACCGATCCTGGAAAAAAAAA71800.13130535444216254No Hit
AGAGGTGCACAATCGACCGATCCGGAAAAAAAAAA71200.13020809521284085No Hit
TTTTCTTTACTTATTCAATGAAGCGCAAAAAAAAA68440.12516070275796107No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAACAAAA67050.12261871887669915No Hit
AGAGGTGCACAATCGACCGATCCTGAAAACAAAAA66930.1223992670308348No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAACAAA66390.12141173372444529No Hit
TATAGATGGATACGAATAAGGCGTCAAAAAAAAAA65010.1188880374970054No Hit
TGTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA64340.1176627646909295No Hit
TTTTCTTTACTTATTCAATGAAGCGAAACAAAAAA63530.11618146473134522No Hit
ATATTAGCATGGAATAATAGAATAAAAAAAAAAAA62320.11396865861887981No Hit
TTTCTTTACTTATTCAATGAAGCGGAGAAAAAAAA61910.11321886481217665No Hit
TTTTCTTTACTTATTCAATGAAGCAAAAAAAAACA61290.1120850302752109No Hit
TTTCTTTACTTATTCAATGAAGCGTAAAAAAAAAA57610.10535517366870452No Hit
AGAGGTGCACAATCGACCGATCCTGAAAAAAAAAC57340.10486140701550976No Hit
GTTTTCTTTACTTATTCAATGAAGCAAAAAAAAAA57270.10473339343875555No Hit
TTTTCTTTACTTATTCAATGAAGCGAAAAAAAACA57230.10466024282346745No Hit
AGAGGTGCACAATCGACCGATCCTCAAAAAAAAAA55130.10081983552084153No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)