FastQCFastQC Report
Thu 24 Aug 2023
SRR10212843.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10212843.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174376592
Total Bases5.5 Gbp
Sequences flagged as poor quality0
Sequence length15-51
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGATGATCCTATGCTGTCGAGAAAAGCC1954452411.208226847328225No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATCAC114433976.562461663432441No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGCC55731403.196036770806944No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTT49440412.8352664444778233No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTT37000662.121882276492707No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTACAA36003902.0647209345621342No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCG32211961.8472639951582492No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGCCG28994371.6627443894533733No Hit
TGGCCTATGGTGTAATTGGCAGCACGACG26050711.4939338876401485No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGA20609381.1818891379641139No Hit
TGGATGATCCTATGCTGTCGAGAAAAGCCT19997881.1468213577657258No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGCCT19593351.123622716516905No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCCGC18516981.0618959682386728No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGT18131721.039802406506488No Hit
GGGCCTGTGGCGCAGTCTGGTAGCGCACCTC18096751.0377969767868844No Hit
ACCGGGACGGACGAACCTCTGGTGTGCCAG17795731.0205343386915142No Hit
GGGGCGGTAGCTCAGCCGGTTAGAGCAGCG15988400.9168891200718041No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGG15659520.8980287904697668No Hit
GCCCCAATAGCTCAGTCGGTAGAGCGTCTC14267970.818227368499093No Hit
CGGATCTCTGGGCCATTACTGACGCTGAGGAGC13926890.7986674037074883No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACTC13805820.7917243846582344No Hit
TCCGCTGTGCGCGTAGGAATATTGAGAAGGGCTGTCC12724540.7297160618897748No Hit
GCCCTTTTAGCTCAGTCGGTAGAGCGTCTC11882270.6814142806506965No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGG11243740.6447964070773903No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACTCG11001160.6308851362343404No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACTC9386570.5382930066668581No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAAC9221840.5288462111933006No Hit
AAGTGGATGATCCTATGCTGTCGAGAAAAGCC9159360.5252631614683695No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGCC8783020.5036811362846224No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGA8712600.49964275021500587No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGC8491350.48695469401076497No Hit
GTCCGGGTGGCGGAATGGCAGACGCGCTAG8045160.46136697063101223No Hit
AGACCCCGGGACCTTTACTACAGTTTGATATTGG7965690.4568095928838889No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTG7633400.4377537095116528No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACT7081870.4061250377000143No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCT6925300.397146194943413No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACT6899000.3956379649855756No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGA6540150.3750589413973637No Hit
CGGGACGGACGAACCTCTGGTGTGCCAG6417470.36802359344194546No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATC6262490.35913593264857474No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGC6257490.35884919691514555No Hit
TGGATGATCCTATGCTGTCGAGAAAAGC6096400.34961114505552443No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGCAG6009080.34460359220691733No Hit
ATCCGCTGTGCGCGTAGGAATATTGAGAAGGGCTGTCC5530140.3171377497732035No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAAC5525050.3168458527965726No Hit
ACCCTGTGGGAGAGTAGGACGCCGCCGA5505430.3157207017785965No Hit
ATGCAGGAGGTCAGGAGTTCATTTCTCCTTAGCTC5206940.2986031519643417No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACT4882790.28001407436612824No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGG4795510.27500881540338856No Hit
AGGAGAAGGTCTACGGTTCGTTTCCGTATTGGGG4720920.2707312917320921No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAAC4710000.2701050608902828No Hit
GTTTCTTGCCGGAGGTAGAGCACTGGATAG4661090.2673002119458786No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTG4580120.26265681347872655No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCCG4507060.2584670309418594No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGC3766330.2159882789772609No Hit
AGGAGAAGGTCAACGGTTCGTTTCCGTTAAAGGG3758930.2155639100917857No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGC3685390.21134660092450938No Hit
AGGGTCGTAGCTCAATTGGTAGAGCACCG3630010.20817071594104786No Hit
AGGAGAAGGTCTACGGTTCGTTTCCGTATTGGG3622990.2077681389713133No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTACA3611570.2071132345561611No Hit
GATGATCCTATGCTGTCGAGAAAAGCC3544180.20324861034100267No Hit
AAGTGGATGATCCTATGCTGTCGAGAAAAGCCT3338300.19144197978132294No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCC3244130.18604159897791786No Hit
GGGGCTATAGCTCAGTTGGTTAGAGCGC3034120.17399812470242565No Hit
AGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGCAG2990670.17150639117892613No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTAC2984980.17118008591428371No Hit
GTTTCTTGCCGGAGGTAGAGCACTGGATAGG2978990.17083657650563558No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATCACC2947270.16901752501276088No Hit
GAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC2946710.1689854106106168No Hit
TCTTGGGCTGCACACGTGCTACAATGGCC2900980.16636292559267357No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGC2879580.16513569665359673No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACTC2688710.1541898467656714No Hit
ACCGTTGGACGCGGGTTCGATTCCCGCCATCTC2606450.1494724704792946No Hit
AGGAGAAGGTCAACGGTTCGTTTCCGTTAAAGG2563620.14701629218674028No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGC2527260.14493114993324333No Hit
ACCGTATGGATAGGCGAAGGACATGCGAAAGGT2511650.14403596097347743No Hit
TGCAGGAGGTCAGGAGTTCATTTCTCCTTAGCTC2511620.14403424055907688No Hit
TGGTGAAGTGGATGATCCTATGCTGTCGAGAAAAGCC2486440.14259023940552756No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCG2485480.14253518614470914No Hit
TGGATGATCCTATGCTGTCGAGAAAAGCCTC2484950.14250479215696565No Hit
ATGCGAAAGGTCCGGCGTAGAGGGTAAGACCCCCG2425590.1391006655296945No Hit
TCCCCTGTAGCTCAATTGGCAGAGCATTCG2260360.12962519648279397No Hit
GCACTCGTAGCTTAACGGATAGAGCATCT2204090.12639827253878205No Hit
AACCGTATGGATAGGCGAAGGACATGCGAAAGGT2190180.12560057372838207No Hit
TGCGAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC2157460.12372417508882155No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGT2144150.1229608845664331No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGG2101690.12052592471815254No Hit
TCCCCTGTAGCTCAATTGGCAGAG2098110.12032062193301726No Hit
CGAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC2030530.11644510175998853No Hit
TCTTGGGCTGCACACGTGCTACAATGGC2029440.11638259337010096No Hit
TACCTGCAGAAGAAGCGCCGGCTAACTACGTG1985640.11387078834526139No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGG1972820.11313559792474899No Hit
TCGGGGTGATGGGGACTCACAGGAGACCGCCGGG1886390.10817908403669226No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTTG1783540.10228093000005413No Hit
GGCTCTGTGGAGCAGTTGGTTAGCTCGCC1748290.10025944307937844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)