FastQCFastQC Report
Wed 23 Aug 2023
SRR10212844.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10212844.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87566574
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length15-51
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGATGATCCTATGCTGTCGAGAAAAGCC73862348.434992557776669No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATCAC43586944.977577402993978No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTT25511732.913409630482974No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTT20726142.3669008679042305No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTACAA18989652.1685957475052065No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCG18316102.091677127850177No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGCCG15807371.8051831055991754No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGG14757571.685297177436678No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCCGC14755431.6850527919477585No Hit
TGGCCTATGGTGTAATTGGCAGCACGACG13322671.5214332811513214No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGCC13088451.4946856319855566No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGA11557581.3198620743115974No Hit
GCCCCAATAGCTCAGTCGGTAGAGCGTCTC10094561.1527869070223073No Hit
ACCGGGACGGACGAACCTCTGGTGTGCCAG10044921.1471180772699867No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGT8623830.9848312667799474No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACTCG8128800.9282994216491786No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACTC7647720.8733606501494509No Hit
GCCCTTTTAGCTCAGTCGGTAGAGCGTCTC7293080.8328611782847642No Hit
GGGCCTGTGGCGCAGTCTGGTAGCGCACCTC6640730.7583635737536106No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACTC6373880.7278896168759554No Hit
TGGATGATCCTATGCTGTCGAGAAAAGCCT6285980.7178515400179982No Hit
GGGGCGGTAGCTCAGCCGGTTAGAGCAGCG5953390.6798701522797956No Hit
AGACCCCGGGACCTTTACTACAGTTTGATATTGG5822470.6649192419015959No Hit
CGGATCTCTGGGCCATTACTGACGCTGAGGAGC5416060.6185076967839349No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGCC5310760.6064825603431739No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAACT5105180.5830055655711733No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGA4941520.5643157856101576No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGG4873000.5564908820116681No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAAC4849620.5538209134458086No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTG4702290.536996000323137No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGC4671930.5335289239476241No Hit
TCCGCTGTGCGCGTAGGAATATTGAGAAGGGCTGTCC4562100.5209864668223745No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACT4335730.4951352784454031No Hit
ATGCGAAAGGTCCGGCGTAGAGGGTAAGACCCCCG4149630.4738828768155301No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGCCT3912550.4468086190056951No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGCT3819400.43617099830809875No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAGC3414010.38987593599356757No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGA3263270.372661604872197No Hit
TGGATGATCCTATGCTGTCGAGAAAAGC3263070.37263876510687743No Hit
AGGCGTTCGGGTGAACTATGGTTAAGGAAC3105070.35459535050440594No Hit
ATGCAGGAGGTCAGGAGTTCATTTCTCCTTAGCTC3075190.3511830895656601No Hit
ACCCTGTGGGAGAGTAGGACGCCGCCGA3042120.34740653437006686No Hit
GTTTCTTGCCGGAGGTAGAGCACTGGATAG3022440.34515910146261974No Hit
GTCCGGGTGGCGGAATGGCAGACGCGCTAG2995060.34203233759036866No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGCAG2896140.33073578966330236No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATC2842060.3245599171208868No Hit
GAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC2835210.323777655158691No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCCG2833930.32363148066064573No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAAC2823810.32247578853547476No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACT2773440.31672359363973746No Hit
CGGGACGGACGAACCTCTGGTGTGCCAG2762990.3155302159017892No Hit
AGGAGAAGGTCTACGGTTCGTTTCCGTATTGGGG2531550.2891000394739664No Hit
AAGTGGATGATCCTATGCTGTCGAGAAAAGCC2435320.2781106863904485No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCG2424760.2769047467815744No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGG2417070.27602655780503643No Hit
TGCAGGAGGTCAGGAGTTCATTTCTCCTTAGCTC2122670.24240642325460854No Hit
AGGAGAAGGTCAACGGTTCGTTTCCGTTAAAGGG2068820.2362568164423105No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTG2019390.2306119684435753No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTACA2009510.22948368403678784No Hit
ATCCGCTGTGCGCGTAGGAATATTGAGAAGGGCTGTCC1981520.22628725888031204No Hit
AGGAGAAGGTCTACGGTTCGTTTCCGTATTGGG1970620.22504249167039467No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGC1932670.22070864620100358No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCC1899510.21692181311101655No Hit
AATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACTC1793360.20479960766764724No Hit
TCCCCTGTAGCTCAATTGGCAGAG1670070.1907200343363896No Hit
CGCGGGGTGGAGCAGCTCGGTAGCTCGC1668770.19057157586181228No Hit
TCTTGGGCTGCACACGTGCTACAATGGCC1662160.18981672161800003No Hit
ACCGTATGGATAGGCGAAGGACATGCGAAAGGTCCGG1628570.1859807830325759No Hit
GTTTCTTGCCGGAGGTAGAGCACTGGATAGG1605380.1833325122437701No Hit
AGACCCCGGGACCTTTACTACAGTTTGATATTG1587680.1813111930129869No Hit
TGCGAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC1546440.17660163340408863No Hit
ACTGGGTTGATAGGCCGGATGTGGAAGCC1540970.17597696582259803No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGC1494640.17068613418631634No Hit
GGGGCTATAGCTCAGTTGGTTAGAGCGC1463930.1671790882214942No Hit
TCTTGGGCTGCACACGTGCTACAATGGC1407880.16077824399068075No Hit
AGGGTCGTAGCTCAATTGGTAGAGCACCG1394140.1592091521132253No Hit
ACCGTATGGATAGGCGAAGGACATGCGAAAGGT1369010.15633933560081956No Hit
AGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTCATTGCAG1331270.152029471885014No Hit
CGCGGGGTGGAGCAGCTCGG1309560.14955021535957316No Hit
AGGAGAAGGTCAACGGTTCGTTTCCGTTAAAGG1294010.14777442360597548No Hit
TCTTGGGCTGCACACGTGCTACAATGGCCGGTAC1291770.14751861823439616No Hit
GCGGACGTGGCTCAGTTGGTAGAGCATCACC1290520.14737586970114874No Hit
TGCGAAAGGTCCGGCGTAGAGGGTAAGACCCCCG1274170.14550871888627273No Hit
ATACCGAGGCGTTCGGGTGAACTATGGTTAAGGAACTCG1257630.14361987029434314No Hit
ACCGTTGGACGCGGGTTCGATTCCCGCCATCTC1246640.142364825190032No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGT1172450.13389241424473225No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGG1143750.1306149079213719No Hit
TGGATGATCCTATGCTGTCGAGAAAAGCCTC1142460.1304675914350606No Hit
AACCGTATGGATAGGCGAAGGACATGCGAAAGGT1141880.1304013561156338No Hit
CGAAAGGTCCGGCGTAGAGGGTAAGACCCCCGTAGC1117750.127645738429826No Hit
TCGGGGTGATGGGGACTCACAGGAGACCGCCGGG1089830.12445730719121202No Hit
AGACCACTGGGTTGATAGGCCGGATGTGGAAGCC1044290.11925669262794272No Hit
ACTGCAGGGGGGACCCTGTGGGAGAGTAGGACGCCGCCGA1042110.11900773918595924No Hit
AACACCGGTGGCGAAGGCGGATCTCTGGGCCAT1032370.1178954426148955No Hit
TCCCCTGTAGCTCAATTGGCAGAGCAG1027440.11733244239976776No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAGGG1014170.11581702397081334No Hit
ATCCTGGGGCTGGAGTCGGTCCCAAGGGTTGGGC985140.11250183203467569No Hit
GATGATCCTATGCTGTCGAGAAAAGCC977600.11164077288212737No Hit
TCCCCTGTAGCTCAATTGGCAGAGCATTCG972350.1110412290424883No Hit
TGGGTGGAGCTGACCGGTACTAATAGGCCGAGGGCTTG971380.11093045618068831No Hit
TAGCGGGGCTCAAGCGTACCGCCGAAGTCGTGTC969360.1106997745509605No Hit
GCCCTCATCGTCTAGTGGCCCAGGACGCCGCC962310.10989467282344516No Hit
AACACCGGTGGCGAAGGCGGATCTCTGGGC933740.10663201234754256No Hit
TACCTGCAGAAGAAGCGCCGGCTAACTACGTG898550.10261335563956173No Hit
TGAAGTGGATGATCCTATGCTGTCGAGAAAAGC894640.10216683822756385No Hit
AGGGCGATTTAGTAGCGCGCTCAAGACCC883550.10090037324059292No Hit
ACCGTTGGACGCGGGTTCGTTTCCCGCCATCTC879960.1004903994531064No Hit
ATGGGTGGAGCTGACCGGTACTAATAGGCCGAG878450.10031795922494353No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)