FastQCFastQC Report
Tue 27 Jun 2023
SRR10295266.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10295266.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10282949
Total Bases781.5 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGGCCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGGTCGGATC254310.24731232256427607No Hit
CTACGAGTCATTTAAGCACCGGGTTCCCCACAAACATGCGGTGCGTCACT248270.24143852118686965No Hit
CTGGAATTGCCACAGTTATCCAAGTAACCGGGTGGAGCGATCAAAGGAAC243710.23700399564366212No Hit
GTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGT228080.2218040758541154No Hit
GTCAAACTCCCCACCTGACGCTGTCCCCGGGGCGGGTCGCGCCCCGGTCG227890.22161930395648174No Hit
CCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGGTCGGATCCCCGCC198210.19275598857876275No Hit
GAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG196700.19128753823441116No Hit
CCAAGATCTGCGCCCGCGGCGGCTCCACCCGGGCCCGCGCCCTGGGCTTC187360.18220454074020984No Hit
GTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACC185120.18002617731547632No Hit
CACAAACATGCGGTGCGTCACTGGAAGAGGGGGCGGCGCTCGTTCTAGCC181030.1760487190979942No Hit
GTCGGGTGGGAGGCCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGG166360.1617823836333332No Hit
CTCATGTCTCTTCACAGGGCCAGACTAGAGTCAAGCTCAACAGGGTCTTC157840.1534968227499718No Hit
CGCCGGTCCCCGTCCCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCC155360.15108506324401685No Hit
CCGGCATCTCCGGGTTCGTTTGCGTCACCGCACTGGGCGCCTCGCGGCGC153740.1495096396957721No Hit
TCCACTTCGGCCTTCAAAGCTCTCGTTTGAATATTTGCTACTACCACCAA151810.14763274620928296No Hit
GTCCGCGACAGTTCTAAGCTGGCTGCTAGCCGCCGGCCGAGGCGCCCGCA151360.14719512855699274No Hit
TGGGAGGCCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGGTCGGAT147450.14339271740042667No Hit
TGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGGTTCATCCCGCAGC136250.13250090027675912No Hit
GTGGGAGGCCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGGTCGGA135770.13203410811431623No Hit
TCGGCATCGGGCGCCTTAACCCGGCGTTCGGTTCATCCCGCAGCACCAGT133660.129982167566911No Hit
CCGCTATCGGTCTCGTGCCGGTATTTAGCCTTAGATGGAGTTTACCACCC132150.12851371722255941No Hit
CCGGGTTCCCCACAAACATGCGGTGCGTCACTGGAAGAGGGGGCGGCGCT132090.12845536820225403No Hit
GTTGCTTTTAGGCGGGATTCTGACTTAGAGGCGTTCAGTCATAATCCCGC130370.12678269628683367No Hit
GTCGAGACCGCAAAAAGGCCCGAGGCGGACGCGGCGGGGGGAGAGAGGGA129840.12626727994080297No Hit
GTCGAGACCGCAAAAAGGCCCGAGGCGGACGCGGCGGGGGGGGAGAGGGA122600.11922649815728932No Hit
CCCTTCTCCACTTCGGCCTTCAAAGCTCTCGTTTGAATATTTGCTACTAC120710.11738850401767041No Hit
CGGGGAGCGTGGTTTGGGAGCCGCGGAGGCGGCCGCGCCGAGCCGGGCCC120470.11715510793644897No Hit
AGACATTCGAATGAACCGTCGCCGCCGCGAGGGCGCGCGATCGGCCCGAG119140.11586170465301346No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC118070.1148211471242345No Hit
TTGGGAGCCGCGGAGGCGGCCGCGCCGAGCCGGGCCCGTGGCCCGCCGGT115670.11248718631202002No Hit
CCCTGGTCCGCGACAGTTCTAAGCTGGCTGCTAGCCGCCGGCCGAGGCGC114940.11177727323163814No Hit
CGCGACAGTTCTAAGCTGGCTGCTAGCCGCCGGCCGAGGCGCCCGCACCG114120.11097983662079819No Hit
CAGAAATCACATCGCGTCAACACCCGCCGAGGGCCTTCGCGATGCTTTGT113540.11041579609117969No Hit
GTCGCATTCCACGCCCGGCTCCAGCGCCAGCGAGCCGGGCCTCTTACCCA110810.10776091566728571No Hit
GTTTGCGTCACCGCACTGGGCGCCTCGCGGCGCCCGTCTCCGCCGCTCCG110650.10760531827980475No Hit
CTTGGCTGTGGTTTCGCTAGATAGCAGGTAGGGACAGTGGGAATCTCGTT110160.10712880128064431No Hit
CGGCGCTCCACCGCGGCGGAAATGCACCCGGCGGCGGCCGAGCCTTCGCC108110.10513520975354443No Hit
CTCCACTTCGGCCTTCAAAGCTCTCGTTTGAATATTTGCTACTACCACCA106700.10376400777636845No Hit
GTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAA104910.10202326200392513No Hit
GCCGGCGTCGCCGCGGACCTCGGGCGCCCGAACGTGGGTCGGATCCCCGC103160.1003214155783521No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)