FastQCFastQC Report
Tue 27 Jun 2023
SRR1029596.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1029596.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11191617
Total Bases570.7 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGGGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT311770.27857457952680115No Hit
ACGTTGTACCGTGTAGTCCGGCTTTGGCAACCGCACGACTTTTCAATCGT190020.16978779742015832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)