FastQCFastQC Report
Tue 27 Jun 2023
SRR1029600.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1029600.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10068000
Total Bases513.4 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGGGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT151990.15096344854986096No Hit
ACGTTGTACCGTGTAGTCCGGCTTTGGCAACCGCACGACTTTTCAATCGT130800.1299165673420739No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)