FastQCFastQC Report
Thu 24 Aug 2023
SRR10311825_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10311825_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40605711
Total Bases6.1 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCG1781099643.863278246747115No Hit
AGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGG37344949.196967392099106No Hit
AAGAGGTGCACAATCGACCGATCCTGCTGTAGGCACCATCAATAGATCGG6488001.5978048013985027No Hit
CAAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATC5671751.3967862796442598No Hit
NAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCG3445010.848405289590915No Hit
AAAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATC3248530.8000180073192167No Hit
TAAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATC2631940.648169908907641No Hit
TCAAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGAT1896020.4669343186725631No Hit
AAGAGGTGCACAATCGACCGATCCTCTGTAGGCACCATCAATAGATCGGA1687290.41553021938219475No Hit
TGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGG1617560.3983577580995934No Hit
ACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGGAAGAGCAC1350030.3324729371196086No Hit
AGAGGTGCACAATCGACCGATCCTGCTGTAGGCACCATCAATAGATCGGA1308920.3223487454757287No Hit
TAGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCG1285180.3165022772289346No Hit
GAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGGA1151680.2836251284948563No Hit
AAGAGGTGCACAATCGACCGATCTGTAGGCACCATCAATAGATCGGAAGA769010.1893846902471428No Hit
AAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGGAAGAGCACA758360.18676190647172758No Hit
NGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGG737550.18163701160164392No Hit
AAGAGGTGCACAATCGACCGATCCTGTAGGCACCATCAATAGATCGGAAG631050.15540917384749156No Hit
AAATCGACCGATCCTGCTGTAGGCACCATCAATAGATCGGAAGAGCACAC548050.1349686993536451No Hit
AGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCGGAA512060.12610541408818085No Hit
ANGAGGTGCACAATCGACCGATCCTGACTGTAGGCACCATCAATAGATCG454910.11203103918067092No Hit
AAGAGGTGCACAATCGACCGATCCTGATCTGTAGGCACCATCAATAGATC446520.1099648273613532No Hit
ACAATCGACCGATCCTGCTGTAGGCACCATCAATAGATCGGAAGAGCACA409940.10095624233743869No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)