FastQCFastQC Report
Tue 27 Jun 2023
SRR1032180.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1032180.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences978970
Total Bases37.2 Mbp
Sequences flagged as poor quality0
Sequence length38
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTAACACAAAGCACCCAACTTACACTTAGGATATTT12360.12625514571437327No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)