FastQCFastQC Report
Sat 26 Aug 2023
SRR10346267_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10346267_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130305628
Total Bases13 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC22861791.7544744882392955No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGC18515841.4209547418780715No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTG16219931.244760510267446No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCAC14033131.076939669865986No Hit
GATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGG12474210.9573040083886477No Hit
GGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTC12216650.9375381698785873No Hit
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT10410720.7989463049132459No Hit
AGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAATA10106330.7755866078171236No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCG9660170.7413471043629827No Hit
CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAAAA8579690.6584281992793128No Hit
TACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCG8245270.632763920219931No Hit
CTACTACCGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGG8018560.6153655926511478No Hit
GGGCCGCCGGTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGGT7409450.5686208733823838No Hit
GGGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGAACT7261120.5572376352002233No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCA6501220.49892089081524554No Hit
ATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAG6500040.4988303344810248No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAAA6384080.4899312560774428No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACC6284810.4823130126044901No Hit
CCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGG6278700.4818441149756018No Hit
TACTACCGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGG5482250.42072242650946745No Hit
GACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCA5225630.40102872609615914No Hit
CGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC4836560.37117046087986316No Hit
GGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCAC4704060.36100205894406956No Hit
CGTACGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACG4620970.35462551164712547No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTCCTCCCGGG4442670.3409422960610726No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA4312070.33091970517190555No Hit
AGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG4260910.32699355088484744No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTAAAAAAAAA4123440.3164437379481414No Hit
ATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGC3740190.2870321149904592No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGG3714940.2850943629234495No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGAAAAAAAAAA3538970.2715899577261544No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTAT3518520.2700205704085168No Hit
GGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGA3466590.26603532427624693No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGTAAAAAAA3324650.2551424716666881No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGGGTCGGGGTTTCGTACGTAGC3281400.25182335178953286No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG3264140.2504987735449155No Hit
GGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGA3138480.2408552913769772No Hit
CCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAAAAA3131570.24032499962319356No Hit
GGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGC3123640.23971643036016832No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTTCTGGGTCGGGGTTTCGTAC2990090.22946744863544957No Hit
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTA2970720.22798094338642075No Hit
GGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCC2907590.22313617950561584No Hit
GGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGAACTA2899960.22255063303942635No Hit
AAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAG2816760.21616564405030916No Hit
GCCGGGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGA2781940.21349346476423875No Hit
AGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTC2455660.18845387092566715No Hit
CCCCCGCCACGCAGTTTTATCCGGTAAAGCGAATGATTAGAGGTCAAAAA2433060.1867194868973733No Hit
CCGGGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGAA2431430.186594396367899No Hit
CCAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACAC2358030.18096148540874996No Hit
CAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATA2286440.17546747865717663No Hit
CAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGC2231480.1712497022768656No Hit
CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAAA2203760.16912239584924146No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTAAAAAAAAAA2176290.16701427508564712No Hit
GAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGC2173410.1667932562360238No Hit
CATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGG2166940.1662967312509326No Hit
CGGGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGAAC2150150.1650082220546913No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAA2126850.16322011816711401No Hit
GGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGG2116210.16240357630600577No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCCCGTGGATCGC2073550.1591297345959608No Hit
CAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAAA2057740.1579164332027163No Hit
GGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGC2011320.1543540391056632No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTTGAAAATCCGGGGGAGAGG1998770.15339091877136726No Hit
GTACGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC1946150.14935272020637513No Hit
GCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGTAAAAAAAA1945330.14928979122835737No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAA1882600.14447572441000014No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAAAAAAAAAAAAAAA1837570.14102000260495273No Hit
AAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATC1835950.14089567950203963No Hit
TGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCT1808670.13880213984310794No Hit
CGGCCGGGCGCGACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACT1799920.13813064160206495No Hit
CGGGCCGCCGGTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGG1760950.13513998029309984No Hit
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA1730090.13277170192526142No Hit
AGTGACGAAAAATAACAATACAGGAAAAAAAAAAAAAAAGATCGGAAGAG1711240.13132510285741458No Hit
AGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCG1695010.1300795695486No Hit
GGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCG1689080.12962448559781317No Hit
AGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAA1678680.12882636197417352No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCT1669490.1281210969644381No Hit
ATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGC1637890.1256960290310715No Hit
CGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGTCCTGGGAAACGGGGCGC1625380.12473597840302031No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAT1578830.1211636077606717No Hit
CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC1575510.12090882214235597No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAG1569860.12047522613528251No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGAAAAAAAAAAA1564870.12009228028124772No Hit
GACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAG1564790.12008614086875817No Hit
AGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAA1563670.12000018909390467No Hit
AGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCA1521910.116795415774367No Hit
AGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTAC1491950.11449620579703587No Hit
CGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAAAAA1472610.11301200282769061No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATGA1462900.1122668316367732No Hit
TGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT1447920.11111722664810762No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGTAAAAAA1445990.11096911332179758No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAAAA1402660.10764385403215279No Hit
GGGACCGGGGTCCGGTGCGGAGTGCCCTTCGTCCTGGGAAACGGGGCGCG1391640.10679814996171921No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAA1391410.10678049915081181No Hit
ATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACG1377010.10567540490269538No Hit
TGGATGGCGCTGGAGCGTCGGGCCCATACCCGGCCGTCGCCGGCAGTCGA1372400.10532162125798587No Hit
AAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCCC1370020.1051389737364222No Hit
CGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTA1354320.1039341140353508No Hit
ACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGAAA1339880.10282595008098959No Hit
GCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC1339490.10279602044510311No Hit
GCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAG1310030.10053518179583157No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)