FastQCFastQC Report
Wed 30 Aug 2023
SRR10346274_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10346274_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93175803
Total Bases9.3 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGG22946672.4627284403441094No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT16527491.7737963578376672No Hit
CCGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGG14997731.6096163936467498No Hit
GGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAA14451031.550942362149538No Hit
GCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAG11111951.192578935971177No Hit
GGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGA8471770.90922425428413No Hit
GCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTA7715140.8280196951991925No Hit
CCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAG7212050.7740260633975969No Hit
CCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAG6940210.7448511068909167No Hit
GAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT6491720.696717365558953No Hit
CGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGA6284660.6744948578548875No Hit
GCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC6067000.6511347157373036No Hit
CGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAA5738380.6158659024382114No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCG5255160.5640047985419563No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC4714720.5060026152927279No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTG4628710.49677167794303856No Hit
GCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT4344260.4662433657802767No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGT4012680.4306568734374095No Hit
GATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGA3972250.4263177640658487No Hit
ACCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT3615470.3880267068908438No Hit
GCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCG3556170.3816623936152179No Hit
GGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT3402110.3651280579787437No Hit
CCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTA3354460.3600140693179752No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA3343150.35880023486355145No Hit
GGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG3202840.34374160424461275No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAA3096680.33234808826922585No Hit
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGA2858080.306740581564937No Hit
GGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTA2812280.3018251423065278No Hit
CCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC2762680.2965018718432725No Hit
GCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG2756350.29582251091519973No Hit
GGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAG2526730.27117877374236316No Hit
GCGGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGA2507650.2691310317980302No Hit
GAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGT2402690.2578663046241737No Hit
GATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCG2356640.2529240343654457No Hit
GCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC2158150.2316212933523095No Hit
CCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG2134870.2291227906026203No Hit
GGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA2124690.22803023226963762No Hit
TCGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGG2099240.22529883643718102No Hit
GGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACG2071340.2223044968015999No Hit
CCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGT1953850.20969499989176374No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCG1921710.2062456064907753No Hit
GATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTCCTCCCGG1815770.194875701795669No Hit
GCGTACGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAAC1793520.19248774276729336No Hit
GGGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAA1780400.1910796518705613No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAG1752080.1880402361544445No Hit
GGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC1676330.17991044305783982No Hit
GGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTC1632790.17523755604231284No Hit
CGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTA1629950.17493275587869095No Hit
GAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTA1517810.16289744237567774No Hit
GAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCT1494440.16038928046587375No Hit
GAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTT1493100.1602454663041648No Hit
GCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAT1491510.16007482114213709No Hit
GAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGAT1490460.159962130940798No Hit
ACGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGG1444660.15504669168238883No Hit
GCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA1402830.15055732870904262No Hit
GAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCA1396500.14987796778096993No Hit
GGGGCCGCCGGTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGG1380000.1481071217599273No Hit
CGGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAA1376670.14774973283568052No Hit
CCGGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGA1368750.14689972674558008No Hit
TGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAA1284320.13783836131790567No Hit
GAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGC1278310.13719334407024106No Hit
CCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA1264290.13568866157236123No Hit
GAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACG1252040.13437394255673868No Hit
GAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAAAAAAAAAAAAA1234600.13250221197449727No Hit
GGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAG1167420.125292185568822No Hit
CGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGTCCTGGGAAACGGGGCGC1131230.12140812996266853No Hit
CAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT1125300.12077169863510594No Hit
ACCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTG1120460.12025225046893345No Hit
CCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC1105090.11860268056933193No Hit
GCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAAAA1088430.11681466270808527No Hit
CCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTA1074630.11533359149048601No Hit
ACCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA1050280.11272025205943222No Hit
GAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGC1043760.1120204995711172No Hit
GCGGCCGGGCGCGACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGAC1028260.11035697755134989No Hit
CTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCC1022220.10970874058364702No Hit
CGCCCTGGCGGACGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAG1007610.10814073692501476No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCC1002650.10760840987868922No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCT989850.10623466266236525No Hit
GCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCCCGTGGATCG985820.10580214693722576No Hit
TCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAG983410.10554349609415226No Hit
AGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC970280.10413433195740744No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAAAAAAAAAAAAAA964540.10351829219008715No Hit
CGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG958530.10287327494242254No Hit
GGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCAC947960.10173886024894252No Hit
GCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGTCCTGGGAAACGGGGCG945490.1014737699657925No Hit
GCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA941620.10105842608085706No Hit
CCGTACGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAAC934260.10026852143147078No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)