FastQCFastQC Report
Tue 18 Jul 2023
SRR10346276_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10346276_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78493199
Total Bases7.8 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACG16299192.0765098387695984No Hit
GGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA11099491.4140702814265476No Hit
GAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGT7046550.8977274578909696No Hit
GAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCA5807390.7398590035806797No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT5599150.7133293165946771No Hit
GAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT5579250.7107940651011052No Hit
GCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC5030870.6409306875109014No Hit
GGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCAC4844220.6171515572960659No Hit
GGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGG4005920.5103524956346855No Hit
GAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGAT3804320.4846687418103573No Hit
GGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATG3520450.4485038251530556No Hit
GAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCT3350200.4268140479278975No Hit
GAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAG3098470.3947437535320735No Hit
GATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCG3074550.3916963557568854No Hit
GATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAAC3068070.39087080652681766No Hit
GAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAAAAAAAAAAAAA3059080.3897254843696713No Hit
GATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAG3011630.38368037465258614No Hit
GATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGA2909240.3706359324200814No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA2893500.3686306631482812No Hit
GAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCC2842900.36218424477769084No Hit
GCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAAAA2748330.35013606720245916No Hit
GAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCA2467540.3143635412285847No Hit
GGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTA2414090.3075540340762516No Hit
GAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACT2387040.30410787563900915No Hit
GGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGAT2335190.2975022078027423No Hit
GAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC2271030.28932825122849176No Hit
CCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC2202690.28062176444101866No Hit
GCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC2141040.27276758079384683No Hit
GAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA2072810.26407510795935324No Hit
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGA2057330.2621029625764138No Hit
GCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG2039120.2597830163604365No Hit
GATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAG2015950.25683116826465435No Hit
GACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGT2005510.25550111672732306No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATG1999140.2546895814502349No Hit
CAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGT1888050.2405367629366208No Hit
GAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA1863710.2374358573409653No Hit
GATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGA1849850.23567009926554272No Hit
GATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAAT1815350.23127481401286754No Hit
GCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCAT1788760.22788725937899407No Hit
GAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG1782010.22702731226434025No Hit
GAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGC1774880.22611895331212073No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCC1771810.22572783662441886No Hit
GGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAAAAAAAAAAAAAA1654310.2107583868508149No Hit
GCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT1604790.20444956001856926No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCG1598840.20369153256194847No Hit
CCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG1594830.2031806602760578No Hit
CAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCA1586960.2021780256401577No Hit
GGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAA1579310.20120341891021667No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTG1560360.1987891970105588No Hit
CAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGAT1484290.18909791152734137No Hit
GAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCC1454090.1852504444365938No Hit
ACCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT1433110.18257760140467713No Hit
GACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGG1416530.1804653164919422No Hit
GAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGG1410710.17972385097975177No Hit
GCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA1365390.1739501023521796No Hit
GAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTC1362370.17356535564310482No Hit
GGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCA1337650.17041603820988363No Hit
CGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTA1319090.1680515021435169No Hit
GAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAA1310940.16701319562730524No Hit
GAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAAAAAAAAAAA1310100.16690617998637053No Hit
CCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAAAA1303550.16607171278622496No Hit
GAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTT1300340.16566276015836734No Hit
GAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCAAAAAAAA1235810.1574416657422766No Hit
GGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACT1210080.1541636747407887No Hit
GGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTAC1192160.1518806744008484No Hit
GGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCAAAA1170170.149079157800665No Hit
CCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA1128500.1437704176128686No Hit
GGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCC1118420.1424862299216522No Hit
GGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAAAAA1097760.1398541547529487No Hit
GGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTT1090510.1389305078520242No Hit
GAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCT1083210.13800049097247266No Hit
CCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC1082930.1379648190921611No Hit
GAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCC1082210.13787309139993134No Hit
GAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTA1042860.13285991822043078No Hit
GACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATC1035890.13197194319981786No Hit
GACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGGCCCTCG1025600.1306610015983678No Hit
CCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGAT1019240.12985074031700505No Hit
ACCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA995410.12681480850334562No Hit
TGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACG993880.12661988715735742No Hit
GGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTT976980.12446683438140926No Hit
GAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAAAAAAAAA964100.12282592788707719No Hit
GGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGC963950.12280681795119601No Hit
GGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGC962250.12259023867787577No Hit
CAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT942920.12012760494065225No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAAAAAAAAAAAAAAAGATCG924010.11771847902389607No Hit
GGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTA911030.11606483257230987No Hit
CAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG894990.11402134342874724No Hit
CAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC887680.11309005255347028No Hit
GCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAA881030.11224284539607056No Hit
CATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCG879590.11205939001161108No Hit
CAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCT876240.11163260144359768No Hit
GCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGAT870160.11085801204254653No Hit
GACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCG865120.11021591819693831No Hit
GGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACAC855970.10905021210818533No Hit
CGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA855300.10896485439458264No Hit
GACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAAC852710.10863488950170065No Hit
GACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATA844770.10762333689572265No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAAAAAAAAAAAAAA826210.10525880082935593No Hit
GATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGG820840.1045746651248091No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAAAAAAAAAAAAAAGATCGGAA811200.10334653324551087No Hit
CAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCC805200.10258213581026299No Hit
GCGGGGCCCGAAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAG800940.10203941363123703No Hit
CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAAAA797820.10164192696490812No Hit
CATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAG795630.10136292190104267No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)