FastQCFastQC Report
Thu 24 Aug 2023
SRR10346286_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10346286_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81374946
Total Bases6.7 Gbp
Sequences flagged as poor quality0
Sequence length35-100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGAT7552270.9280829507401455No Hit
GATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAAC7362530.9047661917956911No Hit
GAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCA6338120.7788785506536618No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCC5938770.729803249270359No Hit
GATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCG5552230.68230214248007No Hit
GGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACG5398250.6633798564978464No Hit
GAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTT4733510.5816913230271145No Hit
GCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG4178640.5135044882241765No Hit
GAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA4016320.49355731676921794No Hit
GGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATG3989240.4902295111814882No Hit
GAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGC3900270.4792961705928505No Hit
GAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC3518960.4324377677620825No Hit
GAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCC3330360.409261101076491No Hit
GCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTA3224920.3963037960111212No Hit
GAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCT3222640.39602361149339504No Hit
CAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGAT3145990.38660425040404944No Hit
CCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG3095440.38039226471498977No Hit
GAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA3053580.3752481752798951No Hit
GGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA2964810.3643394122805317No Hit
GCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA2939740.36125861146500793No Hit
GATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAG2788020.34261405224158303No Hit
CCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT2722150.334519423214118No Hit
CAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCC2682230.32961373639498326No Hit
GAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCA2674850.3287068233507645No Hit
GACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGT2571540.3160112696111651No Hit
GAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGT2363030.29038790391332486No Hit
CCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA2357080.28965672063241676No Hit
GATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAG2220610.2728862025911513No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATG2162510.26574641290698986No Hit
GGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGAT2115510.25997067942754765No Hit
CAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCA2068590.25420477698381516No Hit
CATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCG1970290.24212489185553498No Hit
GAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCC1838050.22587418982741936No Hit
GAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAAAAAAAAAAAAA1784710.2193193467679843No Hit
GAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCC1726940.2122201101061253No Hit
GGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCC1691920.20791657422420903No Hit
GGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACT1685570.20713623576475246No Hit
GCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCAT1676640.20603884640365847No Hit
GAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAG1675690.20592210285460588No Hit
GGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGC1647770.2024910713919245No Hit
GAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTA1616050.19859306573303284No Hit
GAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG1603680.1970729418364222No Hit
GAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCT1597190.1962753990644737No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAA1545140.1898790814558574No Hit
GATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAAT1521340.18695434833222502No Hit
GGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAAAAAAAAAAAAAA1508030.18531870976602555No Hit
CCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTA1440470.1770164001091933No Hit
GAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTC1438890.17682223715392698No Hit
GGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCAC1430140.17574696762317973No Hit
CAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC1418490.1743153230479563No Hit
GATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGG1412770.17361240399471356No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAAAAAAAAAAAAAA1388280.17060287818808506No Hit
GGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGG1373890.16883452063980478No Hit
GCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC1368570.16818075676511046No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1364830.16772115584568253No Hit
GACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGG1348860.1657586353421359No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCG1332480.1637457307805771No Hit
GAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCAAAAAAAA1328790.1632922742584677No Hit
GAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTCC1314750.16156692749141732No Hit
GACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATC1281530.15748458991296901No Hit
GCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAT1249120.15350179157108135No Hit
CAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTT1228080.15091622917943318No Hit
CAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCC1182440.1453076233070557No Hit
GAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT1170760.14387229209344113No Hit
CAGTGACGAAAAATAACAATACAGGAAAAAAAAAAAAAA1162990.14291745275013762No Hit
GGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCA1162750.14288795964300854No Hit
CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTA1104360.1357125324543994No Hit
GGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACAC1056710.129856921809816No Hit
GCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGA1047860.1287693634844317No Hit
GGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAG1019560.12529163460212925No Hit
CAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA1016680.12493771731658047No Hit
GAAGTGGCGTTCAGCCACCCGAGATTGAGCAAAAAAAAAAAAAA1014430.12466121943724545No Hit
CCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGG1006410.12367565810734915No Hit
GACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCG991470.12183971218856476No Hit
CATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAG988800.1215116013717539No Hit
CAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCT977070.12007012576082078No Hit
GGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTT936050.11502926220067783No Hit
GCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAA915920.11255552784022738No Hit
CAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGC901900.11083263883210441No Hit
GGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGC895160.11000437407356313No Hit
CATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAAC882280.10842157732430323No Hit
GGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTT878570.10796566304326642No Hit
GGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAG870440.1069665840392693No Hit
GACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATA868790.10676381892775696No Hit
GGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCAAAA863790.1061493791959014No Hit
GGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAAAAA859020.10556320369171121No Hit
CAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG833580.10243693433603016No Hit
GCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCG828950.10186796314433193No Hit
GCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATT828590.10182372348363831No Hit
GAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATT821810.10099054320724218No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)