FastQCFastQC Report
Thu 24 Aug 2023
SRR10347715_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10347715_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41413629
Total Bases6.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATA3597500.8686753822032838No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAAT3590220.8669175067946835No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATT2958520.7143831804742348No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATC2148940.5188968105161709No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATG2057460.49680746403557147No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAAT1921780.4640453025741839No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAAT1049640.2534527944894662No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAACTGTAGGCACCATCAA926800.22379106163335746No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAA812030.1960779626436505No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAACTGTAGGCACCATCA646330.15606697978580916No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATA561950.13569204476139968No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGGAACTGTAGGCACCATCA514660.12427309859756555No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAA482020.11639163522713743No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATT453190.10943015884939715No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATC424970.10261597697704783No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)