FastQCFastQC Report
Thu 24 Aug 2023
SRR10347716_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10347716_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33983725
Total Bases5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATA4871811.4335715110689013No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAAT4568841.3444200128149577No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATT4020681.1831192725341322No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATC2890090.8504335531199124No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATG2784640.8194039941177726No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAAT2556150.752168869068944No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAAT1647670.48484090546283554No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAA688690.2026528875218947No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAACTGTAGGCACCATCAA635410.18697479455239235No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATA623330.1834201518520998No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAA611970.1800773752730167No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATT497700.14645245628606046No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAATC466590.13729807429880037No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGAACTGTAGGCACCATCA456390.13429663758166593No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAA431550.1269872563999385No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAACTGTAGGCACCATCA412380.1213463209227358No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATAA393520.11579660558105388No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAATA341570.10050987641878575No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)