FastQCFastQC Report
Wed 30 Aug 2023
SRR10347717_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10347717_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51425285
Total Bases7.7 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAAT4195270.8157990762715268No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAACTGTAGGCACCATCAAT911260.17720076806574822No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATA856620.16657564464640304No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAA822380.15991744139094222No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATT681250.13247374321795202No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAATA640220.12449517780990423No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAACTGTAGGCACCATCAATG527320.10254099709899518No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAATT524390.10197123846761375No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)