FastQCFastQC Report
Thu 28 Sept 2023
SRR10382043.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10382043.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9462862
Total Bases268.4 Mbp
Sequences flagged as poor quality0
Sequence length6-61
%GC71

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC3838194.05605619103396No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT2144052.2657521582793874No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC1874551.9809545991476996No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1372121.4500052943813406No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT1331561.4071429975413356No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT1205921.2743713265606114No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC1203051.271338417489339No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCT1083251.1447382409254199No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG994841.0513098468518298No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC989121.0452651639641368No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC909330.9609460647317905No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG800210.8456321142588785No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC799280.8446493249082572No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG773010.8168881676600589No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC730460.7719229129622729No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGT726150.7673682655416512No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT702110.741963689209459No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCC628030.6636787052373795No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC596740.6306125990213108No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC566050.5981805504508044No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC543730.5745936060358906No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC537550.5680628122865999No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC465580.4920075977014143No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT458800.4848427463065613No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG445200.4704707730071515No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC441770.46684607680002094No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCT410720.43403359364217714No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC409520.4327654783510527No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTC393640.41598408599850656No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT373440.39463747859791254No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC355490.37566858736817677No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC351560.37151550978974435No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCC288320.3046858339474886No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT286770.30304785169645293No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG280910.2968552220247955No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC280020.2959147031838782No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC272740.28822147041772356No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT261670.27652310685710096No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA261270.27610040176005946No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA255260.26974925767701147No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCA255180.26966471665760317No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC234360.24766291635659488No Hit
ACGATGCCGACCGGCGATGCGGCGGCGT231000.24411219354144656No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGG227930.2408679319216533No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT221640.23422089427067627No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG220730.2332592401749069No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG219390.231843178099818No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC217790.23015235771165216No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC217080.22940205616440354No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT215800.22804939985387085No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT215490.2277218034036637No Hit
AACGATGCCGACCGGCGATGCGGCGGCG213130.22522784333111906No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG204220.21581208729452042No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT203970.2155478966088695No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCTC200530.21191263277431288No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC193790.2047900518891642No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG189560.20031994548795068No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC189390.20014029582170806No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC186730.19732930692638231No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC184700.19518407855889686No Hit
TCACCTCTAGCATCACCAGTATTAGAGGC183870.19430696548253584No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC179060.1892239366906122No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCT178410.1885370409079198No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG173360.1832003890577713No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGT172520.18231270835398425No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC164560.17390087692285908No Hit
TATCAGA162440.1716605399085393No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG160510.1696209878153142No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC159930.16900806542460411No Hit
CCCCCGCCCCTTGCCTCTCGGCG156490.1653728015900475No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC155160.1639673071423846No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG150360.15889484597788703No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGC146350.15465722738004634No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT145560.15382238481338942No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGG141900.14995463317546No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC141030.14903524958939485No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT138140.14598120526327024No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCC136270.1440050589346014No Hit
TATCAGAT134690.1423353738012876No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC130790.13821399910513332No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC130000.1373791565384764No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCTC129830.13719950687223378No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTAT129420.13676623414776629No Hit
CACCCCCGCGGGGAATCCCCCGCGAGGGGGGT128090.13536073970010343No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCC127890.13514938715158267No Hit
TCTCCCCCGCGGGGGCGCGCCGGC125150.13225385723684865No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC121520.12841780848119733No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG120510.12735047811116765No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC119090.12584987501667044No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG119050.1258076045069663No Hit
TCCCCCGCGGGGGCGCGCCGGC117660.12433870429474718No Hit
CCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT116600.1232185357875873No Hit
CCGCGAGGGGGGCCCGGGC115170.12170736506566407No Hit
ACCTCTAGCATCACCAGTATTAGAGGC114950.12147487726229125No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCT113810.12027016773572309No Hit
CCGCCGGCCGAGGTGGGATCCCGAGGCCTC113100.11951986618847449No Hit
TTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC113040.11945646042391825No Hit
TCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC110340.11660320101888835No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGC109830.1160642520201605No Hit
TTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC108630.1147961367290361No Hit
ACCTCTAGCATCACCAGTATTAGAGGCA108040.11417264671089992No Hit
AAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC107500.11360199482989397No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG105300.11127711679616589No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC99350.10498937847767409No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT98270.10384807471566214No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCT98220.10379523657853196No Hit
AAGCGCCCGGCCGC98080.10364728979456743No Hit
CCCCCCGCGGGGGCGCGCCGGC98060.10362615453971535No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT97480.10301323214900525No Hit
CCCCCGCCCCTTGCCTCTCGGC97050.10255882416968566No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG96040.10149149379965595No Hit

[OK]Adapter Content

Adapter graph