FastQCFastQC Report
Thu 28 Sept 2023
SRR10382044.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10382044.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6183973
Total Bases173.1 Mbp
Sequences flagged as poor quality0
Sequence length6-61
%GC71

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC2202063.560914641768326No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC1333992.1571730665706337No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT1058571.7117959602993091No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC995841.6103563194729342No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT958251.5495701549796548No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT895261.4477100724728262No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT703341.137359428962578No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCT680081.0997460693958399No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC670451.084173556385191No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG626871.013701062407614No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC545320.8818279122499403No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC526590.8515399404234139No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG516820.8357410357386748No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG483810.7823611131549248No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCC454460.7348997157652531No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC418510.6767655680256043No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG400550.6477227504065752No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGT396250.6407692918452264No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC346530.5603679058753976No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC336340.5438898261683872No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC323560.5232235004907039No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC322240.5210889504207085No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC314940.5092842417002791No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC310100.5014575581102958No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC296760.4798856657362508No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT272690.44096246862656097No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT265050.42860795155476905No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC261250.4224630346866004No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCT254050.41082003430480696No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC243670.3940347087543881No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTC222110.3591703909444624No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC213660.34550603632971877No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG211780.3424659195633616No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC202160.32690957738657656No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCC196370.31754666457955105No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG174860.2827632009389433No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCA152240.24618477473947573No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA150570.2434842454842542No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC150160.24282124129584656No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG149530.24180247876243963No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG147150.23795382030290238No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC144220.233215765980867No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC141180.22829983248633198No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG138940.22467756570088518No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC138900.22461288236543075No Hit
TCACCTCTAGCATCACCAGTATTAGAGGC138150.2234000698256606No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC136450.2206510280688483No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC125940.2036554816782027No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC123300.19938638153821175No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG122740.19848081484185004No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG119860.1938236146891327No Hit
CACCCCCGCGGGGAATCCCCCGCGAGGGGGGT119840.1937912730214055No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGG119760.19366190635049668No Hit
TCTCCCCCGCGGGGGCGCGCCGGC117820.1905247645809579No Hit
ACGATGCCGACCGGCGATGCGGCGGCGT116390.18821233533846282No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCTC115780.1872259144727831No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA113830.18407260186938074No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT112980.18269808099097457No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGT112490.18190571013165807No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGG111610.1804826767516611No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG106060.17150786395736203No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCT104670.16926011805032137No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC101890.16476462623624002No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT100880.16313137201601624No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG100240.1620964386487457No Hit
CCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT100130.16191855947624612No Hit
CCCCCGCCCCTTGCCTCTCGGCG97410.15752009266534636No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG96540.15611323011921302No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC93700.15152071330195005No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT93620.15139134663104123No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC92150.14901423405309175No Hit
AAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC91250.14755885900536758No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT90460.14628136313014303No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTAT90450.14626519229627943No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGC88000.14230333799969697No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG87520.14152713797424407No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC86240.13945727123970303No Hit
AAGCGCCCGGCCGC84410.13649800864266387No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCC83500.1350264627610761No Hit
TTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC82160.13285957102335344No Hit
TTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC80610.13035309177449514No Hit
TCCCCCGCGGGGGCGCGCCGGC80140.12959306258290584No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCTC78570.12705424166632034No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC78550.12702189999859315No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG78010.12614867496995863No Hit
TATCAGAT77400.12516225410427892No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC77330.1250490582672337No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT77060.12461244575291644No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC77060.12461244575291644No Hit
TTGGATCGCCCCAGCTGCGGCGGGCGTCGCG74970.12123274147542364No Hit
TCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC74640.12069910395792478No Hit
CCGCGAGGGGGGCCCGGGC74150.1199067330986083No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGC73960.11959948725519985No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC72980.11801474553656686No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT72450.11715769134179596No Hit
AAGCGCCCGGCCG72180.11672107882747872No Hit
TCGCCGCGGCCCGGGTTCGTTTCCCGGTCAGG70570.11411757457543881No Hit
AACGATGCCGACCGGCGATGCGGCGGCG69720.11274305369703264No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG68050.11004252444181112No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCT67000.10834458688613292No Hit
CCCCCGCCCCTTGCCTCTCGGC66920.1082152202152241No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGT66860.1081181952120425No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCT64260.10391377840750597No Hit
CCGCCGGCCGAGGTGGGATCCCGAGGCCTC64000.10349333672705233No Hit
TATCAGA63910.10334779922227992No Hit
GGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC63390.1025069158613726No Hit
GCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC63190.10218349918410057No Hit
ATCACCTCTAGCATCACCAGTATTAGAGGCA62240.10064726996705839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)