FastQCFastQC Report
Thu 28 Sept 2023
SRR10382045.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10382045.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5523452
Total Bases155 Mbp
Sequences flagged as poor quality0
Sequence length6-61
%GC72

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC1732103.1359012443667478No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC1198532.1698930306627084No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT964221.7456836775263007No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT879751.5927539516954252No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT838561.5181810215785347No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT819741.4841081265846068No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC814971.4754722228055934No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT646341.1701740143663781No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG615551.1144298891345483No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG595991.0790172522545682No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG550010.9957722091185006No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG521400.943974891064501No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCT514860.9321344695310106No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC504610.9135772339471765No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC427550.7740630315969071No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC415380.7520297089573694No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC404340.7320422083870739No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC402060.7279143550084258No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG400740.7255245451576297No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGT372590.6745600396273924No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG339410.6144889101960151No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT326960.5919486581941873No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCC322920.5846343916811443No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC298240.539952189319288No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC298090.5396806200180612No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGT282550.5115460404109604No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC274900.4976960060483915No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG246600.44645993121692734No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC232070.42015391823808734No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT230800.41785463148770013No Hit
ACGATGCCGACCGGCGATGCGGCGGCGT227790.41240514084308144No Hit
AACGATGCCGACCGGCGATGCGGCGGCG225380.4080419274033702No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA214960.38917691327814563No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC214140.3876923344314389No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC210670.38141003126305795No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCT206810.37442164791148724No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC182710.33078951351437474No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT178000.32226223745585186No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC173890.31482123860223643No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC172830.31290214887356677No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT172650.31257626571209457No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG171550.3105847575030977No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC162680.29452595949055044No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT152280.2756971546054895No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC148580.2689984451752274No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCC145310.2630782344084822No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGT143640.2600547628548234No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTC135160.24470204502546597No Hit
CGCGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG132830.240483668546409No Hit
CACCCCCGCGGGGAATCCCCCGCGAGGGGGGT129870.23512470100219934No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG129870.23512470100219934No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG116560.2110274516733376No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGG115090.2083660725213146No Hit
TCCCCGCGAGGGGCCCGGGGCGGGGTCCGCCGG114750.20775051543853373No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG114170.20670044747378996No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA113070.20470893926479308No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCA112660.20396664984143972No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT111360.2016130492308071No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC104980.19006230161862545No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG104280.18879497821290017No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC102440.18546372811785095No Hit
TCGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG102390.18537320501744198No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC101730.1841783000920439No Hit
CCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT98660.17862018172693453No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC97660.1768097197187556No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGT93750.16973081326677592No Hit
TCACCTCTAGCATCACCAGTATTAGAGGC93180.16869884992211392No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGT93120.1685902222016232No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGG89910.16277863915536878No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC89070.16125785106849846No Hit
TCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG88200.1596827491213828No Hit
CCGCGAGGGGGGCCCGGGC86180.15602561586486133No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCTC86160.15598940662469774No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC85490.15477639707921786No Hit
TTGGATCGCCCCAGCTGCGGCGGGCGTCGCG84100.15225985488784913No Hit
GCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC83420.15102874072228745No Hit
TCTCCCCCGCGGGGGCGCGCCGGC83140.15052181135999734No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC82290.14898291865304525No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC81240.14708193354445734No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC80700.1461042840600407No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG80360.14548872697725987No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG80180.14516284381578767No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG78750.14257388314409178No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC78720.1425195692838464No Hit
ACGATGCCGACCGGCGATGCGGCGGCG77510.1403289102539499No Hit
AAGCGCCCGGCCGC77240.13984008551174157No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCT76740.13893485450765208No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG76420.13835550666503482No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC75320.136363998456038No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG73030.1322180404573082No Hit
TATCAGA72850.131892157295836No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC72220.1307515662306833No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG72110.1305524154097836No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG71960.13028084610855675No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCTC71420.1293031966241401No Hit
AAGCGCCCGGCCG71400.12926698738397654No Hit
TTTGGTCTAGGGGTATGATTCT71230.12895920884258613No Hit
AAAACGATGCCGACCGGCGATGCGGCGGC70930.12841607024013243No Hit
AAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC70220.1271306422143254No Hit
CCCCCGCCCCTTGCCTCTCGGCG67610.12240533637297835No Hit
CGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG67420.12206134859142434No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC65760.11905598165784731No Hit
GTATAGTGGTGAGTATCCC65540.11865768001604793No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG63710.11534453454108047No Hit
TCTCCCCCGCGGGGGCGCGCCGGCG63540.11503675599969004No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGC63430.11483760517879037No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC61260.11090890262104205No Hit
TATCAGAT60790.11005798547719794No Hit
TCCCCCGCGGGGGCGCGCCGGC59840.10833804656942797No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTAT59580.10786732644730143No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT59120.10703451392353912No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTT58300.10554993507683239No Hit
TCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC57880.10478954103339724No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGC57420.10395672850963492No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCC55740.1009151523358943No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)