FastQCFastQC Report
Thu 28 Sept 2023
SRR10382046.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10382046.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4144329
Total Bases113.2 Mbp
Sequences flagged as poor quality0
Sequence length6-60
%GC72

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC1180802.849194646467498No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC919282.218163664129947No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT756961.8264959176744897No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGT671391.6200209973677282No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC662931.599607560114074No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT637351.5378846611839938No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT591331.4268413535701436No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT531161.281655003741257No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG475441.1472062184252265No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG441961.0664211263150198No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCT440161.0620778417929657No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC402910.9721959815449014No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG353570.8531417269237072No Hit
AACGATGCCGACCGGCGATGCGGCGGCG330210.796775545570827No Hit
ACGATGCCGACCGGCGATGCGGCGGCGT327230.7895849967509818No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT301240.7268727941242117No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG292970.7069178146812186No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC282660.6820404461132309No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC269340.6499001406500304No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC250660.6048264990544912No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGG243080.5865364453449521No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCC227150.5480983773247733No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT220860.5329210108560397No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC186060.4489508434296602No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC178460.43061253100320945No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG168830.40737595881021993No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCT164620.39721749890030444No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC159160.384042869183407No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGT149520.36078216763196164No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC140600.33925877988933795No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC131530.31737345176987636No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC129030.3113411121559123No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC116990.2822893645750615No Hit
ACGATGCCGACCGGCGATGCGGCGGCG113680.2743025469261731No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC110570.2667983164464018No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC104320.2517174674114917No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA101320.24447865987473485No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG101210.24421323693172045No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGTC100960.24361000297032404No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT100670.2429102515751042No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCC99970.24122119648319426No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT94670.22843263650159049No Hit
ACCCCCGCGGGGAATCCCCCGCGAGGGGGG92980.2243547749225508No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC91850.22162815741703906No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC90960.21948064451446786No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG88960.21465477282329662No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTC88390.2132793993913128No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC88380.21325527003285696No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT81930.19769183382882968No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT81820.19742641088581528No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCA75830.18297292517075744No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA75560.1823214324924493No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT74390.17949829755311414No Hit
CACCCCCGCGGGGAATCCCCCGCGAGGGGGGT74370.17945003883620242No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG73570.17751969015973396No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG73560.1774955608012781No Hit
TAACGATGCCGACCGGCGATGCGGCGGCG72770.17558934148326544No Hit
AACCCGGCGGCGGGTCCGGCCGTGTCGGC72390.1746724258619429No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG71730.17307988820385642No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC70880.17102889273510863No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCCT70620.17040152941525638No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC70430.1699430716045951No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC68440.16514132927187972No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGT67800.16359705033070493No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGG67650.16323510995386706No Hit
CCACCCCCGCGGGGAATCCCCCGCGAGGGGGGT64940.15669605381233007No Hit
TCTCCCCCGCGGGGGCGCGCCGGC64360.15529655102189038No Hit
AAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC63190.1524734160825552No Hit
TTCGCCGGCCGAGGTGGGATCCCGAGGCCTC62580.151001525216748No Hit
CGCGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG61320.1479612260513101No Hit
CCGCGAGGGGGGCCCGGGC61050.147309733373002No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC60680.1464169471101353No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC59770.14422117549065241No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG59640.1439074938307263No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC59000.14236321488955148No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG58740.1417358515696992No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT57720.1392746570072019No Hit
TATCAGAT57400.1385025175366145No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC56900.1372960496138217No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC56750.13693410923698385No Hit
TCCCCGCGAGGGGCCCGGGGCGGGGTCCGCCGG55650.13427987980683967No Hit
CCCCCGCCCCTTGCCTCTCGGCG54000.1302985356616234No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC53460.12899555030500717No Hit
TATCAGA53450.1289714209465513No Hit
AAGCGCCCGGCCGC52530.12675151996861253No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC51840.12508659423515844No Hit
AAGCGCCCGGCCG51620.12455574834912962No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG50680.12228758865427915No Hit
GCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC49730.1199952996009728No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGC49180.11866818488590071No Hit
TTTGGTCTAGGGGTATGATTCT48580.11722042337854933No Hit
TCGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCG48480.11697912979399076No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGT48360.1166895774925205No Hit
TCCCCCGCGGGGGCGCGCCGGC46150.11135698927377628No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGT45960.11089853146311501No Hit
CCTCGCCGGCCGAGGTGGGATCCCGAGGCC45790.11048833236936546No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGC45750.11039181493554204No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG45680.11022290942635106No Hit
TTGGATCGCCCCAGCTGCGGCGGGCGTCGCG45380.10949902867267536No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG45170.10899231214510237No Hit
GTATAGTGGTGAGTATCCC45110.10884753599436725No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG45070.10875101856054382No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC44730.10793062037304471No Hit
TCACCTCTAGCATCACCAGTATTAGAGGC43850.10580723682892935No Hit
TCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC43810.10571071939510594No Hit
AAAACGATGCCGACCGGCGATGCGGCGGC43560.10510748543370954No Hit
TCTCCCCCGCGGGGGCGCGCCGGCG43110.104021664303196No Hit
AAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG42920.10356320649253473No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG42820.10332191290797618No Hit
TCGCGCGGGTCGGGGGGCGGGGCGGACTGT42390.10228435049437436No Hit
TTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC42250.10194653947599237No Hit
AACGATGCCGACCGGCGATGCGGCGG41900.10110201193003741No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)