FastQCFastQC Report
Thu 24 Aug 2023
SRR10400967_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10400967_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38476340
Total Bases4.8 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGA1951460.5071844151496738No Hit
TGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGAGA929260.2415146554999774No Hit
CCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAAC839620.21821722128456084No Hit
GGTTGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAG743230.1931654622035256No Hit
GCCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAA705770.18342960894929197No Hit
GCCAGAAGGTCTATAAGCCGGGTTCTGTCCACCAGCAAAGCTGGATAGGC653540.16985503298910445No Hit
GGGTAAGGTAGAATTAGGACATCAGAGATCAGCTTTCAGTTTTTGGAGTG459060.11930968486087813No Hit
GTGAAATTATAGGATATAAGCTATATGAGTATTGTCGGACGTTATTTCGT456110.11854297991960774No Hit
GTCGCATTGGAATAAGGGCAGACTTGATGAGCCGTTTCTACCAGTTTTTT437390.11367765229229185No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)