FastQCFastQC Report
Thu 24 Aug 2023
SRR10400968_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10400968_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38077568
Total Bases4.7 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGA966980.2539500421875683No Hit
TGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGAGA795880.209015449726201No Hit
GTGAAATTATAGGATATAAGCTATATGAGTATTGTCGGACGTTATTTCGT750970.1972211040368965No Hit
CCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAAC647090.16993994994638312No Hit
GCCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAA471820.12391022451854068No Hit
GTGCGCTTTCTTTCAGGTCTTCCAAAGCATCTTTGGCTTTATCAATACCA453470.11909111422242091No Hit
GTCGCATTGGAATAAGGGCAGACTTGATGAGCCGTTTCTACCAGTTTTTT419910.11027752612771907No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)