FastQCFastQC Report
Thu 24 Aug 2023
SRR10400969_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10400969_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40397480
Total Bases5 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGAGA1022180.25303063458413744No Hit
GTTGACTATATTCTGCAAAGAGTAGGGTAAGGTAGAATTAGGACATCAGA847510.20979278905515888No Hit
CCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAAC735500.18206581202589867No Hit
GTGAAATTATAGGATATAAGCTATATGAGTATTGTCGGACGTTATTTCGT630110.15597755107496805No Hit
GCCGGGTTCTGTCCACCAGCAAAGCTGGATAGGCGACCATTCATCTAAAA448430.1110044487923504No Hit
GTGCGCTTTCTTTCAGGTCTTCCAAAGCATCTTTGGCTTTATCAATACCA406500.10062508849561903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)