FastQCFastQC Report
Sun 2 Jul 2023
SRR10446735_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10446735_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73649474
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length18-44
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGCCCGTCCCCGCCCCTTGCCTCTCGG5214870.7080661567250297No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG5046120.685153569460659No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCG4163210.5652735551105226No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCG3625230.49222754802023433No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGC3478900.4723591101275211No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC3318310.45055447374953417No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3271560.4442068384629604No Hit
ACGCGGGAGACCGGGGTTCGATTCCCCGAGGGAGAGCCA2925250.3971854571561502No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT2516760.3417213814724597No Hit
AAACCCTTGTGTCGAGGGCTGACTTTC2334980.3170396030255423No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC2158110.2930244960065838No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2134170.28977396362667845No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGT2119640.2878011050017818No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2107010.28608622513719517No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC2061100.27985264361833734No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG2003660.27205353835928275No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCC1852690.25155508917823366No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTC1838670.249651477483736No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCC1757000.23856246413925508No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1751730.2378469125251322No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTC1747480.23726985477180734No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGC1480650.20104013234364715No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTC1365610.1854201972983541No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCCT1350240.1833332849057415No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGC1330830.18069782820173297No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCT1329390.18050230745707702No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCG1200000.16293395387996934No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGT1168630.15867458876895713No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGTCT1167310.15849536141968915No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCC1079650.1465930360887574No Hit
ACCGGACGCCGCCGGAACCGCGACGCTTTCC1065270.14464054420809577No Hit
CTTCTGGCGCCAAGCGTCCGTCCCGCG1052220.14286863745965112No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCC1041520.14141580970422138No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC996690.13532886874385552No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACG976490.13258614718687606No Hit
AAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAC975340.13243000214774106No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGA958660.1301652201888095No Hit
ACCCGCGCGTCGTTCCCCTCTTCCTCCCCGCGTCCG950360.12903826034113972No Hit
AACGTCCGTCGTGAAGAGGGAAAC912370.12388004291788968No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCG882440.11981619855153344No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC872500.1184665623002277No Hit
AAGCTTGGGCTGCAGGTCGACCCGTGCGGAGGA866680.11767633262390984No Hit
AAGCTTGGGCTGCAGGTCGACCCGTGCGGA865560.11752426093362188No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC834080.11324996021017067No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCC833640.11319021776041469No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCCC824980.1120143777265809No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT824650.11196957088926392No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGC824060.11188946169527295No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCT796870.10819764985694263No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT792840.10765046332849573No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCC786400.1067760511093399No Hit
AAGGCTGAGCTGTGATGACGAGGGAAAT766330.1040509807306974No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGT736840.10004687881409716No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)