FastQCFastQC Report
Fri 30 Jun 2023
SRR10446736_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10446736_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54285642
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length18-95
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCG8488841.5637357664481524No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT8112091.4943343582452244No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCCT7901711.455580096114549No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCC6142811.131571769935041No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGT6056821.1157314856845573No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT4920010.9063188384140322No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC4707070.8670929967080431No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC4520870.8327929510348242No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT4151570.7647639130803685No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTC4106330.756430217772869No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCG3855950.7103075247779146No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTCCCCG3672170.6764532691719848No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGC2980500.5490402047745885No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC2810780.5177759526174527No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC2419430.44568506714906314No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG2415860.4450274346944262No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC2328860.42900109756461935No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCC2324220.4281463595843631No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC2307980.42515477665346574No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGTCT2198340.4049579076544771No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT2026920.3733804971856094No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCC1952990.35976179484070575No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGCCT1878960.34612467141864145No Hit
CGGGTCGGGGGTCGGCGCGCGGCGCGGG1803600.3322425476703398No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC1778940.3276999100425118No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG1747520.32191200759862065No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1685640.31051304505158106No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG1661150.30600172325492625No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC1593240.29349196975509656No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCC1568120.2888645951723294No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC1564360.28817196267108713No Hit
TCCGGCCGTGCCGGTGCGGCGGATCTTTCCCGCTC1503190.27690378977188845No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCCTCTCCCA1483500.27327667967894714No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1467130.270261149347741No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCC1392370.25648955206240354No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1358010.25016006994998785No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTC1338230.24651638088760194No Hit
ACCCGCGCGTCGTTCCCCTCTTCCTCCCCGCGTCCG1283680.23646768329644144No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1282000.23615820920014174No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG1266850.23336741601029604No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCT1262620.23258820444639855No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCT1254060.23101136024144286No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGATT1220260.22478503616112708No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1219460.22463766754384154No Hit
ACCCGTCGCCGCGCTCTCTCTCTCCCCCCGTCCGCCT1199260.22091660995738066No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCC1166880.2149518651727468No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGT1159010.21350212640019992No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC1134770.20903685729644683No Hit
CGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT1125560.20734027608994657No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCG1108090.2041221139099727No Hit
CCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCCT1088810.20057053023339028No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCC1067290.19660631442840817No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGC1057370.19477894357406697No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC1051160.19363499468238765No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGC1036370.1909105173703205No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT1033220.19033025343975854No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCCTCTCCC1018300.18758182872738247No Hit
CGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC994740.18324182294832214No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATC994680.18323077030202573No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC993200.1829581383600474No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGCC987690.18194313700849296No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG935650.172356808454066No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG925180.17042812167534097No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCT921020.16966180486545596No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCCT920640.1695918047722453No Hit
ACCCGTCGCCGCGCTCTCTCTCTCCCCCCG919470.16937627816946516No Hit
AAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCGAG919390.1693615413077366No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCC915330.16861364557501227No Hit
CGGCGGCGACTCTGGACGCGAGCCGGGCCCTT882680.16259916388204454No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGAC879240.16196547882771653No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCC863450.15905679074404241No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC863430.15905310652861027No Hit
GGGCGTCGTCGCGCCGTCGGGTCCCGGGGG862130.15881363252552122No Hit
CGCGGCTGGACGAGGCGCCGCCGCCCTCTCCCAC861060.15861652699990172No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT847880.15618862903012182No Hit
GGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTC838790.15451415311621441No Hit
CGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCC793150.1461067735000721No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT792550.1459962470371079No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCCC786190.14482466652968753No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC781440.14394966536455442No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCG760500.14009229180710436No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT754600.13900544825462322No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCCTCTCCC747780.13774913079226364No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC735470.13548149619378178No Hit
CGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT731260.1347059688453164No Hit
CCGCGGCTGGACGAGGCGCCGCCGCCCTCTCCCAC718280.13231491302985787No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGC710910.13095727964311446No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG709520.1307012266705808No Hit
TCCGGCCGTGCCGGTGCGGCGGATCTTTCCCGCTCCCCG708800.13056859491502376No Hit
CGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC705400.12994227829156005No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT690780.12724911681066606No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGC685130.12620832595108666No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCC681140.12547332497237482No Hit
GGCCGTGCCGGTGCGGCGGATCTTTCCCGCT679430.12515832455292691No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGC677050.12471990291650231No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCC675820.12449332366742571No Hit
ACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAAC659510.12148884598251597No Hit
GGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC659430.1214741091207874No Hit
CGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC658890.12137463530411964No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT657310.12108358228498063No Hit
GGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT651140.11994700182416558No Hit
CGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCT650670.11986042276151031No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCG649090.11956936974237128No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGTC640630.11801094661457627No Hit
GTCGCGCCGTCGGGTCCCGGGGG639500.11780278844266039No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCT635440.11705489270993608No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACG629310.11592568067998532No Hit
ACGCGAGCCGGGCCCTTCCCGTGGATCGCCTCAGCTG628540.11578383838584795No Hit
ACCCGTCGCCGCGCTCTCTCTCTCCCCCCGTCCG620990.1143930470602153No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTC611980.11273330800803645No Hit
ACCCGTCGCCGCGCTCTCTCTCTCCCCCCGT611770.11269462374599898No Hit
CGCGGCTGGACGAGGCGCCGCCGCCCTCTCCCA596950.10996462011078362No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTT584810.10772830134347494No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT577300.10634487844870656No Hit
GGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT573540.10565224594746435No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCC571460.10526908754252184No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC566480.1043517178999191No Hit
CGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCC562350.1035909274131823No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATC558250.1028356632495937No Hit
ACCGGACGCCGCCGGAACCGCGACGCTTTCC556630.10253724179959041No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)