FastQCFastQC Report
Fri 30 Jun 2023
SRR10446737_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10446737_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69976557
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length18-44
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCC20040832.8639348460656615No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGC13182841.8838937731674907No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC7123751.018019506161185No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACG5823050.832142970395071No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT5588250.7985888759859963No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCG5521270.789017098969302No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCC4524060.6465108021819365No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCCT4287730.6127380631201962No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT4205770.6010255691774032No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC4167990.5956266182115819No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTC4043120.5777820706440302No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC3965990.5667598078596522No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT3877220.5540741308549948No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGT3759260.5372170568494817No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCC3401210.4860499209756776No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGTCT3351510.478947542389089No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGC3336420.4767911059127988No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG3282010.4690156447680042No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCC2903370.4149060949083277No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC2678700.38279962816690166No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGC2605480.37233612393933585No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCT2591130.37028543716433493No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC2576990.36826476043969986No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCG2290370.3273053288403429No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT2220900.31737771836931045No Hit
CGTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCC2186150.3124117695587681No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCC2173140.3105525754861017No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC2099470.3000247640077519No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCC2067720.29548753020243623No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCC2022340.289002501223374No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG2002970.2862344313396271No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCC1997420.2854413085799577No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCC1759170.2513941919148723No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1713880.24492202438596689No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG1666810.23819548595396026No Hit
CGGGTCGGGGGTCGGCGCGCGGCGCGGG1560590.22301611666890098No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGT1473520.21057337816720534No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTC1471410.21027184861352927No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1445540.20657489621845787No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG1419280.202822210872707No Hit
CGTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGC1410660.201590369757689No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGG1403160.20051858224462232No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC1313820.18775144938897181No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1312780.18760282818715987No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC1264760.18074053000349816No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTC1256220.17952012128861955No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCC1165660.16657864433084354No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCC1157300.16538395851627852No Hit
CTTCTGGCGCCAAGCGTCCGTCCCGCG1145370.16367910184549378No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1145180.16365194989516274No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1075500.15369432937376443No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1036770.148159618656288No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC1022380.14610321568121737No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT978790.1398739866552737No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC930680.13299882702145518No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCC857780.12258105239444689No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCT846200.12092621247427192No Hit
AGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTC839450.11996160371251188No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCC809800.11572447041085487No Hit
ACCCGCGCGTCGTTCCCCTCTTCCTCCCCGCGTCCG786500.11239478387026101No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATC779480.11139159075803058No Hit
CGTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC775420.11081139645095714No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTCCCCG758120.10833913992081663No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT756330.10808333996769803No Hit
ACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAAC755670.10798902266654818No Hit
CCGTCGCCGCGCTCTCCCTCTCCCCCCG748230.10692580945358601No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCCC739190.10563394823783628No Hit
CTGTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCC731980.10460360317527481No Hit
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCT730300.1043635227723479No Hit
ACCCAGGCGGCCCGGGTTCGACTCCCGGTATGGGAAC729940.1043120769717207No Hit
CGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC729940.1043120769717207No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC725030.10361041341316636No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCG711720.10170834783997731No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT708160.10119960603377501No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCCC700100.10004779171973266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)