FastQCFastQC Report
Fri 30 Jun 2023
SRR10446738_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10446738_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86072870
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length18-44
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCG8415200.9776832119110238No Hit
AAACCCTTGTGTCGAGGGCTGACTTTC6394150.7428763558133938No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT5426990.6305111006522729No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGT5049440.5866471049472384No Hit
ACCGGACGCCGCCGGAACCGCGACGCTTTCC4889660.568083764373141No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT4043920.469825160936309No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT4030770.4682973856919143No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC3908880.4541361290729588No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGC3839480.4460731935626174No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCC3813280.4430292611365231No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT3623110.4209351913094103No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTC3559520.41354726524164936No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3459010.4018699504268882No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC3437970.3994255100358568No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG3332210.3871382469296074No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC3112860.36165402640808886No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCC3029120.35192506070728213No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG2833430.3291896738194044No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTC2778800.32284272616911697No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC2551480.29643254605080555No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTC2433380.28271161400799116No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG2431030.2824385895346582No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCG2315360.26899997641533274No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC2067640.240219711507238No Hit
ACCGGACGCCGCCGGAACCGCGACGCTTTCCAAGGC1997960.23212424542135052No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGG1877300.2181058909735437No Hit
GAGCCGCCCCGGCGGTGAACGGGGAGGAGGCGGGAAC1834780.21316589071562272No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1824760.21200176083358205No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGA1806990.20993723109267765No Hit
AAGCTTGGGCTGCAGGTCGACCCGTGC1801070.20924944178113267No Hit
CGGGTCGGGGGTCGGCGCGCGGCGCGGG1747750.20305469075214988No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCC1746130.2028664781364906No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCCGCCT1744670.20269685442114338No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCCGTCC1656630.19246831202445092No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1627560.18909094119900963No Hit
CGTCCCCGCTCGGCGGGGTCCCCGCGTCGT1561470.18141256356387325No Hit
AAAAAGCGACGTCGCTATGAACGCTTGGCCGCCAC1483380.17234001840533494No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1446060.16800415740755478No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTCCCCG1441480.16747205013612304No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCC1433900.1665914009838408No Hit
GGGGCCCGGTGGGGGGCGGGGCGGACTGTC1401390.16281436880169092No Hit
ACGGGCCCGGCTCGGCGCGGCCGCCTCCGCGGCTCCCAAACC1355690.15750491415006843No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGC1354810.15740267519835227No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGTCT1318910.1532317906908414No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCT1273190.14792001242667988No Hit
ACCCGTCGCCGCGCTCTCTCTCTCCCCCCG1242820.14439160678620336No Hit
GGCGGGAGAGGCCGGGAGGGAGGAAGAC1233860.1433506283687299No Hit
CTTCTGGCGCCAAGCGTCCGTCCCGCG1219840.14172177597888858No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1216640.14134999797264805No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTC1200360.1394585773658994No Hit
ACGCCCGCGGTCGGCGGGAGAGGCCGGGAGGGAGGAAGAC1198430.13923434875588556No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGC1188910.13812830918732No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCG1182770.137414960137846No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCC1174750.13648319150970567No Hit
GAACGGAAGGACGGACGGCGCCGGACGCGC1137370.1321403596743085No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCC1133040.1316372975596143No Hit
GAGCCGCCCCGGCGGTGAACGGGGAGGAGGCGGGAACC1102790.12812283359437182No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACG1101100.12792648833482606No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCC1081530.12565283346541134No Hit
ACCGGACGCCGCCGGAACCGCGACGCTTTC1078330.12528105545917081No Hit
CCCGTCCCCGCCCCTTGCCTCTCGGCGCCC1029750.11963700060193183No Hit
ACCCGCGCGTCGTTCCCCTCTTCCTCCCCGCGTCCG1025360.11912696764962061No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG1017240.11818358095878527No Hit
ACGGGCCCCTCTCTCGGGGCGAACCCATTCC1005880.1168637690366314No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC993780.11545798345053442No Hit
CGCCCGTCCCCGCCCCTTGCCTCTCGGCGCC990810.11511292698849242No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGC975420.1133249071397294No Hit
TGGGGAAGGTGGCTCGGGGGGGGCGGCGCGT959620.11148925323391679No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT957480.11124062669224345No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAA957240.1112127433417754No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCT957000.11118485999130735No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCC953840.11081772921014484No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGC939170.10911335941278594No Hit
AACCTGTCTCACGACGGTCTAAACCCAGCTC937610.10893211763474367No Hit
AAAAAGCGACGTCGCTATGAACGCTTGGCCGCC936120.10875900850058794No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCC930020.10805030667619193No Hit
ACGTGTTAGACTCCTTGGTCCGTGTTTC911870.10594162829704644No Hit
AAGGGCCAGCGAGAGCTCACCGGACGCCGCCGGAAC896720.10418149179875147No Hit
GGAAGGACGGACGGCGCCGGACGCGC890060.10340772882326335No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)